Lagopus muta (rock ptarmigan): 125702181
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Entry
125702181 CDS
T09141
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125702181 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125702181 (NUP85)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125702181 (NUP85)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125702181 (NUP85)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125702181 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
125702181
NCBI-ProteinID:
XP_048821070
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All DBs
Position
18:10617526..10631837
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AA seq
744 aa
AA seq
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MSSGGSFTCEGLECVKRDPSLESDRGSAPGTAPPRSRCLPTAPLRDCSGPPRRGLSVPAL
FPGRAAAPAPKSRSLGGAEVVPGADPARTRLCFAWGPAEMLLCETLFGCRGRERREAPGG
SAGPGPAGCGAAGGGDGAAGAACVFVVRRDQDIYMETLRKLFNESHGIFVGLQRCEEERA
ARARNAQLVQVSKNYRSVIRACMEDMHQAAISTRDSALHSQYSIQVSILSAMELIWNLCE
ILFVEAAPAGPLLLRLLDWVQLHICDVDNMVREVLSSDNPSKHKLFWNVVDIFVLQGRMD
EARHLLSKEAIANPTSMNMYKILDDLMKKMPVPSLGNTQTLTEMELKWQHWHEECQRYLQ
DGTFASNSHMESICKILLGDENAILEKKELMTTWYHFLVTRLLYSHPTVKPMELRFYAQS
SMDMFLGEESSPEPLDIILMAAFEFELHQVIKECSVALSNWWFVAHLTDLLDHCKLLQSH
NLYFGSNMREFLLLEYASGLFSHHSLWQLGVDYFDHCPEYGRVYLELHIERIPLNTEQKA
LKVLRICEQRQMHEQVRSICKIMAMKALRNNRLGSALSWSIRAKDAAFATLISDRFLKDY
CERGCFSDLDLIDNLGPSMLLSDRLTFLGKYREFHRLYGEKRFSEAARLLLMLMTAHIAP
CSFWMTLLTDALPLLEQKEVIFSAEQTNELMRCLEDLTAGKLDRQKFQDDDVETMKVEML
RLALARNLARVIVKEGTLEGSCRQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggaggctcatttacctgcgagggcctcgaatgcgtaaagagagacccatcg
ttagagagcgaccgcggctcggcgccgggcacagctccgccccgctcccgctgcctcccc
accgccccgctccgggattgcagcggcccgccccgccggggcctttcggtgccggcgctg
tttccggggcgagcggccgcgcctgccccaaagtcgcggagcctaggcggtgccgaggtg
gtgccgggcgccgacccggcccggacgcggctgtgcttcgcgtggggccccgccgagatg
ctgctgtgcgagacgctcttcggctgcagaggcagggagcgccgcgaggctccgggaggc
agcgcagggccggggccggcggggtgcggcgctgcgggcggtggggacggagcggcgggc
gccgcgtgtgtgttcgtggtccgcagggatcaggacatctacatggagacgctgcggaag
ctcttcaacgaatcccacggcatcttcgtcgggctgcagcgctgcgaggaggagcgagcc
gcgagggcgaggaacgcgcaattagtccaagtgagcaaaaactaccgctcggtcataaga
gcctgcatggaggacatgcaccaggctgcaatttcaacccgggactctgccctgcacagc
cagtacagcattcaggtttctattctctctgctatggagctgatttggaatctgtgtgag
attctgtttgttgaagcagctccagccggtcctctcctgcttcgtctccttgactgggtt
caacttcacatctgtgatgtagacaacatggtccgtgaagttctgagcagtgacaatcca
tcaaaacacaagctcttctggaacgtggtggatatctttgtgctgcaaggccgaatggat
gaagcacgccacttgctctccaaggaagccattgcaaatcccacatcaatgaacatgtac
aaaatcctggatgatttgatgaagaagatgcctgtgcccagtcttggtaacacccaaacg
ctgactgagatggagctgaaatggcagcactggcatgaagaatgccaacgttatctacag
gatggaacctttgcttccaattcccacatggaatccatctgcaaaatcctgctgggagat
gagaatgccatactagaaaaaaaggaactcatgactacttggtaccactttctggttact
cgactcctgtattcgcatccaactgtgaagccaatggaactgcggttctatgcacagtct
agtatggacatgttcctgggtgaagaaagcagccctgaacctctagacataattttaatg
gcagcctttgaatttgagcttcaccaagtgatcaaggagtgcagtgttgctctgagcaac
tggtggtttgtggctcatctgactgaccttctggatcactgtaaactcctgcaatctcac
aatctctattttggttcaaacatgcgtgaatttcttttactagagtatgcctcaggactc
ttctcccatcacagtctgtggcagctgggggtggattactttgaccactgtccagaatat
ggcagggtctatttggaacttcatattgagcggatacctcttaacacagaacagaaggcc
ctcaaagtgctgagaatctgcgagcaaagacagatgcacgaacaagtccgaagcatctgt
aaaatcatggccatgaaggctctgcgaaataatcgcttgggctctgccctgtcttggagc
atcagagccaaggatgcagcttttgctacactaatatcagatcgattccttaaggactac
tgcgaaaggggatgcttttctgacttagacctcatagataatttgggaccatccatgctg
ctcagtgaccggctgacatttctcggcaagtaccgtgaattccaccgtctgtatggggag
aagcggttctctgaagctgccaggctgcttttgatgctgatgactgctcacattgcccct
tgctccttctggatgaccctcctgacagatgcccttcccctgctggagcagaaagaggtc
atattttcagcagagcagactaacgaattaatgcgatgcctggaagatctaacagcaggg
aagctggataggcagaagtttcaggatgatgatgttgagaccatgaaagtggaaatgctg
agacttgctcttgcgcgaaatcttgcacgagtcattgtcaaagaaggcacattagaagga
tcttgtagacagtaa
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