KEGG   Lagopus muta (rock ptarmigan): 125702187
Entry
125702187         CDS       T09141                                 
Symbol
CLTRN
Name
(RefSeq) collectrin
  KO
K20004  collectrin
Organism
lmut  Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lmut04131]
    125702187 (CLTRN)
Membrane trafficking [BR:lmut04131]
 SNARE
  SNARE associated proteins
   Others
    125702187 (CLTRN)
SSDB
Motif
Pfam: Collectrin Pilin_N DUF2140 DUF7027 MscL DUF4199 Glycophorin_A EphA2_TM CcmH DUF4381
Other DBs
NCBI-GeneID: 125702187
NCBI-ProteinID: XP_048821089
LinkDB
Position
1:121149126..121170642
AA seq 226 aa
MFGVLLLAFSVVSVASAELCKPDAQNAFKVRLSIKTALGDNAYAWDANEEYLFKAMMAFA
MRRYSSKNTTQISNVLLCNVTDRVSFWFVVTDSSKNTTTVPGSEVEAAIRMNRDRINSAF
LLSDKTLQFLKISTTLSPPVEPSTPVWLIVFGVVLSLIVAGIVFLIVSGIRKHKKKNKES
TERENLEEKGEVTITIENGIPCETLDLKAGHVNGVFAADDERFTSL
NT seq 681 nt   +upstreamnt  +downstreamnt
atgtttggagttttgctgcttgctttctctgtagtttctgtcgcttctgctgagctctgc
aagccagatgcacagaatgctttcaaagtgcggcttagtatcaaaacagctttgggagat
aatgcatatgcctgggatgcaaatgaagagtacctcttcaaggcaatgatggcttttgca
atgagaagatactccagcaagaacacaactcaaatttccaacgtgctgctttgcaatgtg
acggatcgggtgtcattttggtttgtggtcacagattcctccaaaaacacgacaactgtt
ccgggaagtgaggtagaggcagccatcaggatgaaccgggacagaatcaacagcgccttc
ctactgagtgacaaaacattgcagttcctgaagatatctacaaccttatcacctcctgtt
gagccctccacacctgtctggcttattgtatttggtgttgttctttctctcattgtggct
ggaattgttttcctcattgtttcagggattcggaaacacaagaaaaagaataaagagtca
acagagagagaaaatttagaagagaaaggcgaagtgacaataacaattgaaaatgggatt
ccttgcgaaacactggatttaaaagcaggccacgttaatggagtctttgcagcagatgat
gaacggttcacgtccttatga

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