Lagopus muta (rock ptarmigan): 125702199
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Entry
125702199 CDS
T09141
Symbol
CFAP52
Name
(RefSeq) cilia- and flagella-associated protein 52 isoform X1
KO
K24728
cilia- and flagella-associated protein 52
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmut03037
]
125702199 (CFAP52)
Cilium and associated proteins [BR:
lmut03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
125702199 (CFAP52)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SPT8
WD40_like
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
Beta-prop_VPS8
Mala_s_1-like
Beta-prop_DCAF4
Beta-prop_SCAP
WDR54
B-prop_COPA_B_2nd
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
125702199
NCBI-ProteinID:
XP_048821109
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Position
18:2184807..2204400
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AA seq
625 aa
AA seq
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MATATPEEKEAGRLELRAAIGFNGHIASGLICHPDNKHLLYPLGCTVVIQDLASKKQTFL
HGHTNNVSCVVVSSSGSYVASGQVTFMGFKADIILWDFQKKELLARLSLHKGKVEGLAFS
PNDLYLVSLGGRDDGSVVVWDVPRREAVCGSPASARSAGNVTIVQCSACRDEMFVTAGVE
TIRVWELDLPNRKLRPAECQTGQLRRVITSLKIADDDNYFYVGTSTGDVLKVNTRNKLMT
DFGPQKKFSLGVTALLLLKTGDVIVGTGGGTVALCKGSNYKVMKTIQVQGGVTSLTRRGQ
GHQFFVGTKTCQIYRVNYTAFKEELITTCHSEAVHDIVFPSGTSDLFATCSKDDIRVWHT
PENRELLRIVIPNMTCYAIEFMRDGKSIISAWNDGKIRAFMPESGREKYVINNAHSLGVT
AIAATNDCKRILSGGGEGQVRLWAIGEKTHKLEVVLKEHISAVSCIKIKKNDKECVTASL
DGTCIIWDIGRFTRKQMILANTLFKCVCYHPEEYQLITSGTDRRIGYWEVYDGSAIRDLE
GSLSGSINGMDITSDGANFVTGGDDHLVKMWDYNEGTVTHIGVGHSGNITRLKICPEKKY
IVSVSADGAILLWKYPAPNAGAAAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgacgccggaggagaaggaggcggggaggctggagctgcgggcggccatc
ggcttcaatggacacattgcctcaggcctcatctgtcaccctgacaacaagcaccttctc
tacccgctgggatgcaccgtggttatccaggacctggccagcaagaagcaaaccttcttg
catggccacaccaacaatgtctcctgtgtcgtcgtgtcaagcagtgggagctacgttgcc
tctggacaagtcaccttcatgggcttcaaggcagacatcattctgtgggattttcagaag
aaggagttgcttgcccggctgtcccttcataagggtaaagttgaaggactggcattctct
ccgaacgacctttatctcgtgtcactgggaggccgggatgatggcagtgtggttgtgtgg
gatgtccccagaagagaggctgtctgtgggagccctgcctcagcccggagcgcaggcaat
gtgaccatcgtgcagtgctctgcctgcagggacgagatgtttgtcactgctggagttgag
accattcgagtatgggagctggatctaccaaacagaaagctccgaccagccgaatgccag
acagggcagctgaggagggtgatcacaagccttaagatagcagatgatgataattacttt
tacgttggcacatcaactggtgatgtcctgaaagtgaacacaaggaacaagctgatgact
gattttgggcctcagaagaagttttcgttgggagtcacggcgttgcttttgctgaagaca
ggagatgtaatagttggcactggaggagggactgtggcgctctgtaaaggctcaaactac
aaagtgatgaagaccattcaagttcaaggcggtgtcacttccctgacacgcagaggtcag
ggccaccagttctttgtggggacgaagacgtgccagatctatcgggttaactacacggcc
tttaaagaggagctgatcaccacctgccacagtgaggctgttcacgacatcgtgtttcct
tctgggacttcagacttgtttgcaacctgctccaaagatgacattcgggtatggcacacc
ccagagaacagggagctcctccgaatcgtcatccccaacatgacctgctatgccatagag
ttcatgagggatggcaagagcatcatttcagcttggaacgatggaaaaatccgtgccttc
atgccagagagtggacgggaaaagtatgtcattaacaatgcccacagcctgggggtgaca
gcgatcgctgctactaacgactgtaagcggatcctcagtggaggaggagaagggcaggtg
aggctctgggcaattggtgagaaaactcacaaactggaagtagttctgaaggagcacatt
tctgctgtgtcttgtattaagattaagaagaatgacaaagagtgtgtcacagccagcctt
gatggaacctgcatcatctgggatatcgggcgctttacaagaaaacaaatgattctggcc
aacacactgttcaaatgtgtgtgttaccatcctgaggaataccagctgatcaccagtggg
acagacaggaggattggatactgggaagtgtatgatggctctgctatcagagatttggaa
ggctcgctatcgggttccatcaatgggatggacatcacatcagatggggcaaactttgtc
acaggtggtgacgaccacctggtgaaaatgtgggactacaacgaggggacggtgacccac
attggagtgggccatagtggcaacatcacccgactcaagatctgccctgagaaaaagtac
atcgtgagtgtgagtgccgatggtgccatcctgctctggaagtaccctgcccctaacgca
ggagctgctgcttcctaa
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