Lagopus muta (rock ptarmigan): 125702375
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Entry
125702375 CDS
T09141
Symbol
CHAD
Name
(RefSeq) chondroadherin isoform X1
KO
K06248
chondroadherin
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04510
Focal adhesion
lmut04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125702375 (CHAD)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125702375 (CHAD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lmut00535
]
125702375 (CHAD)
Proteoglycans [BR:
lmut00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
125702375 (CHAD)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
125702375
NCBI-ProteinID:
XP_048821514
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Position
18:10284721..10302216
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AA seq
371 aa
AA seq
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MNRSGCLLSVLSFLACLISVVQACPPSCHCHGGDLQHVICDNAGLKKIPKVPEQTRLLNL
QKNNFPVLPTNGFRDMKKLVSLHLQSSRIKEISAGAFRGLKNLVYLYLTDNQISVIKPGA
FDDLSELTYLYLDQNKIPDLSKGILSPLVNLFILHLGSNKIRELKAGVFSGAKDLRWLFL
SDNSLTNLLPGALEDVENLAVLHLDKNQLSSYPVSAMSKLRVLEELKLSHNPIEVIPDNA
FQSFGRYMQTLHLDNMKLKKFADNAFAGVTVLKAAHLENNRLTQLPRNFPFDKMETLTLS
RNAWHCNCQLAHLRKYAATHAFLPLIACGLLGVPRPTWGRRRWQKAMLGPPAPCAATAEP
PVSSCVLPPGG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggtcaggctgcctcctcagtgtcctcagcttcctggcctgcctcatctccgtc
gtgcaagcatgtcccccgagctgccactgccacggtggggacctgcagcacgtcatctgt
gacaatgctgggttgaagaagatccccaaggtgcctgagcaaacacggcttctcaacctg
cagaagaacaatttccctgtcctgccgaccaatggcttccgggacatgaaaaagctggtg
tccctccatctccagagctcacggatcaaggagatctcagccggagccttcagagggctc
aagaacctggtctacctctacctcactgacaaccagatcagtgtcataaagccgggagcc
tttgatgacctctctgagctcacctacctgtacctggaccagaataagatcccagactta
tccaaagggatcctttcccctcttgtcaatctcttcatcctgcacctaggcagcaataaa
atccgggagctgaaagcgggggtcttcagtggcgctaaagacctgcgctggctcttcctc
tctgacaactccctcaccaacctcctgcccggggccctggaggacgtggaaaatctcgct
gtcctccacctggacaagaaccagctgagcagctatcctgtgagcgcaatgagcaagctg
agagtgctggaggagctgaagctttcccacaacccaatcgaggtgattccagacaacgct
ttccagtcctttgggcgttacatgcagactctgcacctggacaacatgaaactgaaaaag
tttgcagacaacgcgttcgccggcgtcaccgttctgaaggccgcacacctggagaacaac
cggctgacgcagctgccccgcaacttcccctttgacaagatggagaccctgacgctctcc
aggaacgcctggcactgcaactgccagctggcacatctgcgcaagtacgcggccacgcac
gccttccttcccctcatcgcctgcggtctcctcggggtgccccggcccacatggggcagg
aggagatggcagaaggcaatgctcggcccgccggctccgtgcgcggccacagcggagcct
cctgtaagctcctgtgttctccccccaggtggctga
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