Lagopus muta (rock ptarmigan): 125702418
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Entry
125702418 CDS
T09141
Symbol
TSC1
Name
(RefSeq) hamartin isoform X1
KO
K07206
tuberous sclerosis 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04140
Autophagy - animal
lmut04150
mTOR signaling pathway
lmut04218
Cellular senescence
lmut04910
Insulin signaling pathway
lmut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
125702418 (TSC1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125702418 (TSC1)
09143 Cell growth and death
04218 Cellular senescence
125702418 (TSC1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
125702418 (TSC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125702418 (TSC1)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
Motif
Other DBs
NCBI-GeneID:
125702418
NCBI-ProteinID:
XP_048821591
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Position
19:complement(6719398..6747037)
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AA seq
1158 aa
AA seq
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MAQQGNVGELLSMLDSPILGVLEDITAAFKDNLICDRGPMLVNSLVDYYLETNSQQALHI
LSTLQEPHDKHLLDKINEYMGKAATRLPTLSLLGHVIRRQPSWKHKLSQAPLLLSLLKCL
KTDTDVVVLTTGVLVLITMLPMIPQSGKQYLHDFFGIFGRLSAWCLQNPGHVAEIYLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENLGTFEEVVKPMMEHVRIHPELVTGSKDH
ELDPRRWKRLETHDVVIECAKISLDPAEASYEDGYYSASRKSCTNLKHHQTDPSASHYID
TQSSYGTSTPYSTPRLTLSQLPGQLPQILSPQSIKLSTEPQQVTIWSPSAVCGMTTPPTS
PGIVPSESSQSASQPYSKAFGTSAVGKGTPLGTPATSPPPCTSDDFVHVSLPSAAATPPK
KEDKPDSGRPSLYRQQNVISSDKSLDTSGSKSSVTLSDLPEFLGGLSFEDSAEKDREEDA
ISKEISEITTDAEHMVPRGGFDSPFYHTNENLSGSQKKTHSVVSSVQGHSLTSEPLISSL
DKPGPESVLETPKQTFTPIDKPCRGSGESPAGNREGTSGETSILTPSPCKASAQGRAVFG
SGQPPLYEHLFEVALPKTAYLFVGKKTEELLKKAKGTQDKDWMSSTSPVEVLDRLIQQGA
DAHTKELNKLSLPSKSADWTHFGGSPPSDEIHTLRNQLLLLHNQLLYERFKRQQHALRNR
RLLRKVIKATALEEHNAAMKDQLKLQEREIQALKLSLQKEQARYHQFQEEHESIVAQLHS
QIRQLQHDREEFYNQSQELQTKLEDCRTMIADLRLELKKANNKVCHTELLLSQVSQKLSN
SESVQQQMEFLNRQLLVLGEVNELYLEQLQHKHTDTTKEVEMLHAAFRKELEKAKLCVQQ
QSQRLDASQKRIAELESQLSKKDHLFLEQKKYLEDVKIKARGQLQAVESRYRAQKRITQA
FELEILNLFGRLENSPLKKLEDEKTEAAEAAEERLDCGNEGCADTVAGYSEETIDRNGET
KPPSTRGSSSSKGGSNSELSTPEKKQNQRFSSRWETSMLREPSTTVPLTVGSLPSSKSFL
GMKSRELFRNKSESQCDEHGVTINSLSDTLKTELCKDPSMETKAPPSPDNLSLSPKIQES
SVGQLHIMDYNETHHDHS
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaagggaatgttggtgagctcctctcaatgctggattctccaattctgggt
gttctggaagacataacagctgcattcaaagataatctcatctgtgaccgtggacctatg
cttgtgaacagcctggtggactattacttggaaaccaattctcagcaagcactgcatata
ctgtccacattgcaggagcctcacgacaagcaccttctggacaaaattaatgaatatatg
ggcaaagctgctactcgtttacccactctctcgctgctgggacatgtgataagaagacaa
ccatcgtggaaacataagctttctcaagcacctctcctgctctcattgcttaaatgtctc
aagactgacacagatgtagtagtactcaccacaggtgtcctagtgctaataaccatgttg
ccaatgattcctcagtctggcaaacagtacctccatgatttctttggtatctttgggcgt
ctctcagcctggtgcttgcagaatccaggtcacgtggcagagatttatcttgtccatctt
catgccagtgtttatgctctctttcatcggctttatggaatgtatccttgcaattttgtc
tcctttctgcgttctcactacagtatgaaggaaaacttggggacctttgaagaggtagtc
aagccaatgatggaacatgtgcgaattcatccagaattagtgactggatctaaggaccat
gaactggacccacgaaggtggaaaagactagaaactcatgatgttgtgatagaatgtgcc
aaaatctccctggaccctgcagaagcctcatatgaagatggctattactctgcgtctcgg
aaatcctgtacaaacttaaaacatcatcaaactgaccccagtgccagccattacattgac
acacagagcagctatgggacatctaccccatattccactcctcgactaacactatcacaa
ctgccagggcagctacctcagattctgagcccgcagtcaataaagctgtcaactgagcca
cagcaggttaccatctggagtccttctgcagtttgtggtatgaccactccaccaacctcc
cctggaattgtcccatcagagtcatcccagtcagcatcgcaaccttacagcaaagctttt
ggcacatctgcagtggggaagggaacacctttggggacaccagccacatctcctccaccc
tgcacttcagatgactttgtgcatgtctcacttccttcagctgctgccacacctcctaaa
aaggaggacaaaccagattctgggaggccttcactgtaccgacagcaaaatgtcataagc
agcgataaatcattggacacatctggtagtaaaagttcagtaaccttaagtgatcttcca
gagtttttaggcggtttgtcttttgaagatagtgctgaaaaggacagagaagaagatgca
atatctaaagagatctctgagatcacaaccgatgctgaacacatggtgcctagaggaggt
tttgactctccattttaccacacaaatgaaaatctgtcgggttctcagaagaagacccac
tcagtagtctctagtgttcagggacacagtctgacctctgagcctttaatatcttctctg
gacaagcctgggcctgagagtgtgctggagacacccaaacaaacatttactcccatagac
aaaccctgcagaggctctggtgaaagccctgctggtaacagggaaggaacctctggggag
acgagtattctcactcccagcccttgcaaagcatcagcacaaggaagagcagtgtttggg
agtggacagcctcccctgtatgagcacctttttgaggttgcgttaccaaagactgcctac
ctctttgttggcaagaagactgaggagctgctaaagaaagccaagggaacccaggataaa
gactggatgtcctctacttctcccgtggaagtactggataggctgatacagcaaggggca
gatgcacacactaaggaactgaacaaattgtctctgccaagcaaatctgctgactggact
cactttggaggttctcccccttcagatgagattcacaccctgcgtaaccaattgctgttg
ctgcacaaccagctgctgtacgaacgcttcaaaagacaacagcacgccctccggaaccgg
cgcctcttgagaaaagtgattaaagccacagcactggaggagcacaacgctgccatgaaa
gatcagctgaaattacaggaaagagaaatccaggccttgaaactgagtctgcagaaagaa
caggccaggtaccaccagtttcaggaggagcatgaaagtatagtggctcagcttcacagc
cagatcagacagctgcaacatgaccgtgaggaattctacaaccagagccaggaattgcag
accaagctggaagactgcaggaccatgattgcagatctgaggttagaattgaaaaaggct
aacaacaaagtctgtcacacagaactgctgcttagccaagtttctcaaaagctttccaac
agtgaatcagtgcaacagcagatggagttcttgaacagacaacttctggttcttggagag
gtcaatgagttgtacctggagcagctgcagcacaagcacacagacactacaaaggaggtt
gaaatgttgcatgctgcttttcgaaaggaactggagaaagcaaaattgtgtgttcagcag
caaagccaaaggctcgatgcttcccagaaacggatagctgaactggaatctcagctttct
aaaaaggaccacctgttcttggagcaaaagaaatacctggaggatgtcaaaatcaaagca
agaggtcagttgcaagcagtagaaagtagatacagggcccagaaaagaatcacccaggcg
tttgagctggagatcttgaacctgtttggccgactggagaacagcccactgaaaaaactt
gaagatgaaaaaacagaagcagctgaagcagcagaagaaaggctggattgtggtaacgaa
ggttgtgcagatactgtggcaggatacagtgaagaaaccattgatagaaatggagaaacc
aaacctcccagcactcgaggtagcagtagcagtaaaggtggtagcaacagtgagctctcc
accccagaaaaaaaacagaaccagagattcagcagtcgctgggagacctccatgttgcgg
gagccctccactaccgtcccactgactgtaggttcactccccagctccaagagcttcctt
ggcatgaagtcacgagagttgtttcgcaacaagagtgagagccagtgtgatgagcacggt
gtaaccatcaacagcctttctgatactctaaagactgaactatgtaaagatccaagcatg
gagacgaaggctcctccaagccccgataaccttagcctctcacctaagatccaggaaagc
agtgttggacagcttcatatcatggactacaacgaaactcatcatgaccacagttaa
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integrated database retrieval system