Lagopus muta (rock ptarmigan): 125702421
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Entry
125702421 CDS
T09141
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125702421 (TTF1)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
125702421 (TTF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Poxvirus_B22R_N
WbqC
Motif
Other DBs
NCBI-GeneID:
125702421
NCBI-ProteinID:
XP_048821603
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Position
19:complement(6517266..6525863)
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AA seq
706 aa
AA seq
DB search
MREKANGDDFPIWDSHKKKKRKRKRFSEDHENGSIQDAELSCASTQLSEDHAGQSSEVAK
KKKKKKKKREEQQHLLENSLAELECEVGSETVVDASRKKKKRRKWKLNESMDSHGDVACV
PVNQDCVDSCQEDDADNVCFKKSVKKKRKRKVPEEDGVSESPASETHGNKRPKKKKRRVS
STQDTQEDSDANVDLSLLTCPGQKKQQEGMESPSTTGEGGVAASQCRGSACGASAVSEDP
TDEPTDFSKPAAEAKKSSRWAAKVIKSRTYITEDSSSDSDAMTPETTTSSKKEDQNNSFT
ETTATDELSLDDEEFLHMVTVLDLDTARQELEEFIPHVGQLSDHSIRKMAGRDLLRFKQF
KRQGIAIKFGRFTQKENNQIRKNVEEFLSITGIDSAEKLLFTSRYPEEKEAINRLKAEHR
FCEKLAEGIPRAWRLIYYRARKIFDPNNYKGRYTKEEKEKLKRYHALHGNDWKKIAEMMS
RSNLSVAMKYSEIKSQINYGPWSKEEIRKLMHAVEEVMVKRASLENANSLSSSKKSHRSL
QIDREKLFEKLPWTEIETKVGTRYWRQCKQKWTSILTNKITKGQQLHRGTKRLQASINLI
KRLYEMKVEDANEVKWQELSGIIGDVPGSYVQAKFYKLKVSYVPFWREKTFSEIIDYLFE
KTLPEFEQKLEKRKGKQSNSTDSTVNPKKQVFQLSDVFDSSEESDD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaaaagcaaatggtgatgattttcccatttgggattctcacaagaagaaaaag
agaaaacgcaaacggttcagtgaggaccacgagaatggaagcatccaggatgcagagctc
agctgtgcttctacgcagctctctgaagatcatgcaggacagagcagtgaagtcgctaaa
aagaagaagaaaaagaaaaaaaagagagaggagcagcagcatctgctggagaattctctt
gcagaactggaatgtgaagtaggtagtgaaactgtggtggatgcttcccggaagaaaaag
aaaagaaggaagtggaagctcaatgagagtatggatagtcacggtgatgtagcttgtgtc
cctgtaaatcaggattgtgttgatagttgtcaggaggatgatgctgataacgtgtgtttt
aaaaagtctgttaagaagaaaagaaaacgaaaagtgccagaagaggatggggtgagtgag
tcaccagcttcagaaacacatggcaataaaaggccgaaaaagaagaagagaagagtgagc
agtacccaggatacgcaggaggacagcgatgcaaatgttgacctgtcacttctgacatgt
ccaggccaaaagaagcaacaggagggcatggagtcaccatccaccacaggtgagggtggt
gtggcagcgtcgcagtgcagaggcagcgcctgtggtgcttctgctgtcagtgaggatcct
acagacgaacccactgatttctccaaacctgctgcagaagctaagaagtcatctagatgg
gctgcaaaggttataaaaagcaggacttacatcacagaagacagctcttcagattctgat
gcaatgacacctgaaaccacaacatcaagtaaaaaggaggaccagaataattcgtttact
gaaaccacggctactgatgagctcagtctggatgatgaagagttcctgcacatggttaca
gtcttggatttagatactgcaaggcaagaattggaggagtttattcctcatgtgggtcaa
ttgtctgaccattcaatcagaaaaatggctggaagagacttactgagatttaaacagttt
aaaagacaaggtatcgctatcaagtttggcagattcacccagaaagaaaataatcaaatc
aggaaaaatgttgaagagttcttatcaattactgggatagacagtgctgaaaagctcctg
tttacctccaggtatccagaagagaaggaagccatcaatcggctcaaagcagagcaccgt
ttttgtgaaaagcttgctgagggcatacctcgagcctggagacttatatattaccgagca
aggaagatatttgaccccaataattacaaagggaggtatactaaagaagaaaaagaaaaa
ttgaagaggtatcatgctctccatggcaacgactggaagaagattgctgaaatgatgtcc
cgttctaatctctcagttgccatgaaatactctgaaatcaagtcacaaattaattatggt
ccttggtcaaaagaagagatccggaagttgatgcacgcagtggaggaagtgatggtaaaa
agagcaagcttggaaaatgcaaattctctttcatcatcaaaaaaatcacacagaagtctc
cagattgaccgtgagaaactttttgagaaattaccatggactgagattgaaactaaagtg
ggcacgaggtattggagacaatgtaagcagaaatggacttcaattctaaccaacaagatt
accaaagggcagcagttacacaggggaaccaaaagattacaagccagcatcaaccttatt
aaaaggttgtacgaaatgaaagtggaagatgctaatgaagtaaaatggcaagaactcagt
ggtattattggagatgttcctggcagctacgtgcaagcaaaattttacaagcttaaagtc
tcctatgttcctttttggcgagaaaagactttttctgaaatcattgattaccttttcgaa
aagacactgccagaatttgagcagaagttggaaaagaggaaagggaagcagtcgaactcc
actgattcaacagtcaatccaaagaaacaggttttccagctcagtgatgttttcgactcc
agtgaagagagtgatgactga
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