Lagopus muta (rock ptarmigan): 125702422
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Entry
125702422 CDS
T09141
Symbol
DDX31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmut01009
]
125702422 (DDX31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmut03009
]
125702422 (DDX31)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125702422 (DDX31)
Protein phosphatases and associated proteins [BR:
lmut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125702422 (DDX31)
Ribosome biogenesis [BR:
lmut03009
]
Eukaryotic type
Pre-60S particles
Helicases
125702422 (DDX31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
ERCC3_RAD25_C
NAT10_TcmA_helicase
PRDM2_PR
SecA_DEAD
FF
Motif
Other DBs
NCBI-GeneID:
125702422
NCBI-ProteinID:
XP_048821604
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All DBs
Position
19:complement(6591619..6634174)
Genome browser
AA seq
705 aa
AA seq
DB search
MEEDGPLLLNLGRRNALKRKLQSSPHGNPPLKRKSKPSVNNFKKRAAETGTREKGSSSQR
SLPKKQLTANQNESQKSKLFIKTSSLFKNNPDIPEIHRKAVQQVQENVFTTDSFSQLDLH
PHLIATITTVLKIHSMTSVQKQTIPVLLQGKDALVRSQTGSGKTLAYGIPLVQSLQGMKS
KIQRSDGPYALVLVPTRELALQTFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGIN
ILISTPGRLVDHIKSTECIHFRRTQWLIVDEADRILDLGFEKDVTVILNALNAEREMRQN
VLLSATLTEGVTRLADISLNDPIRISIADEVRKSLKPALQREKEANGSSDCMEQENFAVP
EKLKQYFMMVPSKLRLVTLAAFILEKCMYAKQQKMIIFFSSCEQVEFHYELLVNVLSGEL
ESEQPKRSPVSVQLQFLRLHGNMEQEERTEVFQEFLKSNTGILLCTDVAARGLDLPQVMW
IVQYNAPASPAEYIHRIGRTARIGCHGNSLLVLAPSEAEYVSLLASHKINVSEIKMEKVL
STLMKDDRFRLHRPGSKKSYGVDPQEVRERATVLQTKFENYVHSSEGTIQWAKKALQSFL
CAYTAYPRSLKHIFHIRSIHLGHVAKSFGLRDAPQNLTTLPTANSKKKTKLKAKRSDLLK
KTRGKHRLAEILRSEYSSGMDSGVSKVKKKRKKKQRKTGDQQTPV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgggccgctgctcctcaaccttgggcggcgtaatgctctgaaaagaaag
ctccagtcgtcaccacatggaaacccacctctgaaacgtaaatctaagccatcagtaaac
aacttcaagaaacgtgctgcagagactggcaccagggaaaagggaagctcatcacaaaga
tctcttcctaagaagcaactgactgccaaccaaaacgaaagccagaaaagcaaactgttc
attaagacatccagcctgtttaaaaacaaccctgatatcccagaaattcacagaaaagca
gtgcagcaggtgcaagaaaatgttttcactacagactctttcagccagttggacctccat
ccacacctgatagccacaataactacagttctgaagatacatagtatgaccagtgttcag
aagcaaacaattcctgtgctcctgcaaggcaaagatgctctggtgagatctcagactggt
tcaggtaaaactctcgcctatggaattccacttgtacagtctttgcaaggaatgaaatcc
aaaatacagcgaagtgatgggccttatgcactggtgttagtcccaacaagagagcttgca
ctccagacttttgatacaatacagaagctactcaagccatttacctggattgtgcctgga
gtgcttatggggggagaaaagagaaaatcagaaaaagccagattacggaaggggataaat
atccttatttcaactcctggtcgcctggttgatcacatcaagtccacagaatgtattcat
ttccgtcgcactcagtggctgatcgttgatgaggcagacaggatcctggacctgggcttt
gagaaggatgtaactgtgatacttaatgctttaaatgctgagagggagatgcgtcagaat
gtcctgctctcagccacactcactgaaggagtaacacggttggctgatatcagtttgaat
gatcccatcagaatttccatagcagatgaagtccgaaagagtcttaaaccagcattacaa
agagagaaagaagccaacggttcctcagactgtatggagcaggaaaactttgctgttccg
gagaagcttaagcagtatttcatgatggtccccagcaaattgaggcttgtcacgttagca
gcttttatcctggagaaatgcatgtatgcaaagcaacagaagatgatcatctttttctcc
agttgtgaacaagtggaattccactatgagctccttgttaatgtcctttcaggagagcta
gagtctgaacagcctaaacgttcacctgtctctgtgcaattacagtttctacgactgcat
ggcaacatggaacaggaagaaagaacagaggtcttccaggagttcctaaaatccaatacc
ggcatcttactttgcactgacgtcgcagcacgtggactagacctgcctcaagtcatgtgg
attgtgcagtataacgctccagcttcacctgcggaatacatccaccggatcgggaggacg
gctcggattggctgtcacgggaacagcctgcttgtcctggcgccttcggaggcagaatat
gtcagcttgctggcttctcacaagattaatgtctcagagataaagatggagaaggtctta
tccaccctgatgaaagacgatcgcttcaggctgcacagaccaggaagcaagaaatcctat
ggtgtggatcctcaggaagtccgggagcgggccacggtcctgcagacaaaatttgagaat
tatgttcactccagtgaggggaccatccagtgggccaaaaaagcactgcagtcttttctt
tgtgcctacactgcctatcccagaagcctcaagcacatcttccacatcagatctatccac
ctgggtcatgtggccaagagctttggcctgagagatgctccccagaacctgactactctt
ccaactgcgaactcaaagaagaaaaccaaactaaaagcaaaaaggtctgaccttctcaag
aagactcgtggcaaacatcgcctggctgagatcttgcgatctgaatattccagtgggatg
gacagtggtgtatccaaggtcaagaagaagaggaagaaaaaacagagaaaaactggcgac
cagcagaccccagtgtga
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