Lagopus muta (rock ptarmigan): 125702441
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Entry
125702441 CDS
T09141
Symbol
DYNC2I2
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic dynein 2 intermediate chain 2
KO
K22868
WD repeat-containing protein 34
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmut03037
]
125702441 (DYNC2I2)
Cilium and associated proteins [BR:
lmut03037
]
Primary cilia and associated proteins
Dynein and associated proteins
125702441 (DYNC2I2)
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Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_IFT140_1st
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
WD40_RFWD3
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
125702441
NCBI-ProteinID:
XP_048821657
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Position
19:complement(5266784..5274066)
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AA seq
544 aa
AA seq
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MAAARVSYRXRRDVIARRISVSMATGGRGAAAPVAGXPPAGFAAMFADETSPGAAVRSLW
RSARNARCEAKSCQTGEVATAEVAVQSRSSRDAAVQTDQSAVPDVQQGACVDDSGVLAFL
RRVEEVVIKELNRNVTSRAFDGFDVNWTDQNRTVLCLHTLSYPEAQDQHLQVTGVSWNAT
GSVVACSYGRLNDGNWSTEKSYVCTWNLDRRRLDPQRPDLVVDAPSSVMCLAFHPSQPSL
IAAGLFSGEAVVWDTSKPEDPLMWWTGMTDDTHTDPVYQVHWLPDAKHGNHVELLSASTD
GKILVWREERDGRLAVAEGFALVAQQIPRSAQLKKLVWGETAVGVTSLSFSHFDPHVFIV
GVEGGFSLKCSTAADTPAPRRTGGSVPLRAPAELAFSPHSGPVYSVSCSPFHRNLFLSCG
TDGQVHLSSMLQTQPLISLQLSTKYLFCVRWSPIRPLVFAVASGEGDVHLFDFEKSSQKP
AVSIKQAVDECPVYCLEFNAKQTQLLAAGDAAGTVKVWQLSSDFTEQRPREMNHLEQLAS
ELTD
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgcgagtcagttaccgcnnacgtcgtgacgtcatcgcgcggcgcatctcc
gtctccatggcaactggcgggcgcggagcggcggctccggtggccgggnatcctcccgcc
ggcttcgccgccatgttcgcggacgagacgtcgcccggcgccgcggtacgatcgctgtgg
aggagcgcccggaacgcgcgctgcgaggcgaaaagctgccagactggggaagttgcaacg
gcagaggttgcagtgcagtcgcggagcagcagagatgccgctgtgcagacggatcagagc
gcagtcccagacgtgcagcaaggagcctgtgtggatgacagcggtgtgctggcattcctc
cggagggtggaggaggtcgttatcaaagagctgaacaggaacgtgacaagtcgtgccttc
gatggctttgacgtgaactggacggatcagaacagaacagtgttgtgtttgcatacactg
tcatacccagaggctcaggatcaacacctgcaggttactggtgtctcatggaatgcaaca
ggatctgttgtagcatgctcgtatggccggttgaatgatggcaactggagcacagagaaa
tcctatgtctgtacctggaatctggatagaagaaggttggatccacaacgtcccgacctt
gtggtggatgctcccagttctgtcatgtgcttggccttccatccttcccagccttcactg
atagctgctggtctgttcagtggggaagcagtggtgtgggacaccagcaaaccagaagac
cccttgatgtggtggacagggatgacagatgacactcacactgatccagtctatcaggtt
cactggctgcccgatgccaagcatggaaaccacgtggagctgctgagtgcatccacggat
ggtaagatcctggtgtggagggaggagcgagacgggcggctggccgtggctgaagggttt
gccctggtggcccagcagatccctcgcagcgctcagctgaagaagctcgtgtggggagag
acggctgtaggtgtgacatcgctctctttttcacactttgatccccacgtgttcattgtt
ggtgtggaaggcggcttctcactcaagtgctccactgcagcagacaccccagctccccgc
cggacaggaggttctgttcccctcagagcaccagctgagctcgccttctccccgcacagc
gggccggtgtactccgtcagctgctcccccttccacaggaatctctttctgagctgtggg
actgatggacaagttcacctgagctccatgttgcagacacaacccctcatttctcttcag
ttatctacaaaatacctcttctgtgttcgctggtctcccatccgacctctggtctttgca
gtggcttctggggaaggagatgtgcacctgtttgactttgagaagagctcccagaagcct
gctgtttccataaagcaggccgtggatgaatgccccgtgtactgtttagaatttaacgcc
aagcaaactcagctcctggcagcaggggatgctgctggaacagtcaaagtctggcagctg
agttctgacttcaccgagcagcggcccagggaaatgaatcacctggagcagctggcaagt
gagctcacagactga
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