Lagopus muta (rock ptarmigan): 125702460
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Entry
125702460 CDS
T09141
Symbol
BBX
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125702460 (BBX)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125702460 (BBX)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
125702460
NCBI-ProteinID:
XP_048821713
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Position
1:87053165..87193244
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AA seq
912 aa
AA seq
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MVGGLPRCPARPVTWRTREVTVMKGSSRNKDHSTEGEGTGKRPKRKCLQWHPLLAKKLLD
FSEEEEEEEEEEDIDKVPLLGADGLEQDADETEDDESSEQRARRPMNAFLLFCKRHRSLV
RKEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVK
TQTSTVTSRKKLWAFPSDSAKDIPSPRKVTKSEEMPQLNFGMADPTQMGGLSMLLLAGEH
ALTAQEVSSNTCQSDATDSTEVCQKSSLFQFAEISSSTSQPGVPGAVKQTEESALFQFAE
ISSNTSQLSSPEPVKHCGKSALFQLAEISSSTSHSGPDLTKQCGTSALFQLAEMCLASEG
VKVKEPGKIKVEVSEDVTREVPEMEVEELEKTTIKDSCTRKMEQSETLKNWDETKAEELE
TVKCSDFTSLLKDSNPFERNDNTKDYVCRSPELSLAEMSILGLGKPEKLKKKKKKNKLDR
HTNEKSTPKKPCKKRQSSESDIESVMYTIEAVAKGDWGAERLEETPRKKARPSSNVKGSM
LDTKSPKKKVKSKEKKTSKEKPMETTKESKPPDFLSITANKEVPCEASDSIKVEPLTPTE
EVVPQSLPEQVKTEDSDCVKKIETCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKR
SSGKGNSSDHEGCWNEENWAFSQSGTSGNKKLKRPKPKEEFVFGLAKLEEEFEKKFNSLP
QYSPITFDRKNSSVPRKKRKVGSGSSEQPKSNKAILSEDRNPIELAWRNKICLSALNTPE
PAMMHEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLEEKPKDLPQSSLQKASSAEMD
CNSECSGNAETQENHSITSDMPAVSAFFSLAALAEVAAMENVHRNQRATPLPHDGQPNEM
SQAPVLISCADQ
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggtaggcgggctgccgcgctgccctgcgagacctgtgacctggcggacgcgggaggtc
acagtaatgaaaggcagtagtaggaataaggatcattcgacagaaggagaaggaactggg
aaacgaccaaaaagaaagtgtcttcagtggcatcccctgcttgccaagaaactacttgac
ttttctgaagaggaggaggaagaagaggaggaggaagatattgataaggtgccactcctt
ggcgctgatggtttagagcaggatgctgatgaaactgaagacgacgagtcctcagagcaa
cgagctcgccgaccaatgaatgcatttctcttgttctgcaaacgccatcgctctctggtg
cggaaagaacaccctcgcctcgataaccgtggcgcaaccaagatcttggcagattggtgg
gctgttctagatccaaaagagaagcagaaatacactgacatggccaaggagtacaaggat
gcatttatgaaggcaaatccagggtacaagtggtgccccacaacaaacaaacctgtgaaa
acccagacatccactgttacaagcaggaagaagctgtgggccttcccttcagactctgcg
aaagatataccaagcccgaggaaagtgacaaaaagtgaagaaatgccacagcttaacttt
gggatggcagatcctacacaaatgggaggcctgagtatgctgcttttagctggggaacat
gccctgactgcacaagaggtttcctcaaatacttgccaatctgatgcgactgattctaca
gaagtgtgtcagaagtcgtcgttgtttcagtttgcagagatctcttcaagcacatcacag
ccaggagttccaggagctgtaaaacaaacggaagagtctgcattatttcagtttgctgag
atttcatcaaatacttcccaactgtcaagtcctgagccagtaaagcactgtgggaagtcg
gcactcttccagttggcagagatttcttcaagtacatcccattcaggtcctgatttaaca
aagcagtgtggaacatcagcattatttcaactggcagagatgtgccttgcttcagaaggg
gtaaaagtgaaagaacctgggaaaataaaagtggaagtatcagaagatgtgacaagggaa
gttcctgaaatggaagtggaagaactggagaagacaacaataaaagactcctgtacaaga
aaaatggaacaatcagagacattgaaaaactgggatgagacaaaagctgaggaattagaa
actgtaaaatgcagtgattttactagtcttctaaaggatagcaatccttttgagagaaat
gataacacaaaggattacgtgtgccgttctccagagctttcattagctgaaatgagtatc
cttgggctaggcaagccagaaaagttgaagaagaagaagaagaaaaataagttggaccgg
cacacgaatgaaaaatccacccctaaaaagccttgtaaaaagaggcagtcctccgagtcg
gacattgagagtgtaatgtatacaattgaagctgttgcaaaaggagattggggtgctgag
agacttgaagaaactccacgcaaaaaagcccgcccatcctcaaatgtgaagggaagcatg
ttggatacaaaatcaccaaagaaaaaagtgaaatctaaagagaagaagacatcaaaggag
aaacccatggagaccaccaaagaatcgaagcctcctgatttccttagtattacagccaac
aaggaagtaccctgtgaggcttctgatagcattaaagtggaaccactgaccccaacagag
gaggtggtgccccagagcttaccagaacaggtcaaaacagaggacagtgactgtgttaaa
aaaatagaaacctgtggctccaggaaatcagagagatcttgcaaaggtgctctttataaa
actctggtgtcagagggcatgcttacgtctctgcgtgctaacgtggacagaggaaaaaga
agctcaggaaaaggcaactcctcagatcatgaaggatgctggaatgaagaaaactgggct
ttttcccaaagtgggacaagtgggaacaaaaaactgaaaaggcctaagccaaaggaagaa
tttgtttttggcttagcaaagttggaagaagaatttgaaaagaaattcaacagcctccct
caatacagtcctattacctttgacaggaaaaattcatctgttccaaggaaaaagagaaag
gttggaagcggctcatctgaacaaccaaaatccaacaaagccatactctcagaagacaga
aatcccattgagcttgcctggaggaataaaatttgtttatctgccctaaacactccagag
ccagcgatgatgcatgagcctttagttggaagccagaaaaggaaagcgaggaaaactaag
atcactcatcttgttcgaacagcagatggtcgcgtgtcaccagcaggagggacactggag
gaaaagccaaaagatcttccacagagcagtcttcaaaaagcgtcaagtgcagaaatggat
tgcaacagtgaatgctccggaaatgcagagacacaagaaaatcatagtattacatcagat
atgccagcagtgtctgcattttttagcttagctgctctggcagaggtagcagcaatggaa
aatgtacacagaaatcagagggccacacctctcccacatgatggacagccaaatgaaatg
tctcaggctccagtgcttatttcctgcgctgaccagtga
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