Lagopus muta (rock ptarmigan): 125702576
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Entry
125702576 CDS
T09141
Symbol
NELFB
Name
(RefSeq) negative elongation factor B
KO
K15180
negative elongation factor B
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125702576 (NELFB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125702576 (NELFB)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
125702576 (NELFB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COBRA1
Motif
Other DBs
NCBI-GeneID:
125702576
NCBI-ProteinID:
XP_048821985
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All DBs
Position
19:2010168..2027480
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AA seq
577 aa
AA seq
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MYAGLQELGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQSALPFLDLHGTPRLE
FHQSVFDELREKLLERISAIALEGKVEERYKKLEDLLEKSFSLVKMPSIQPVVMCVMKHL
PKVPEKKLKLVMADKDLYKACAVEVKRQIWQDNQALFGDEVSPLLKQYILEKENILFSND
ISVLHNFFSPSPKARRQGEVVQKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAE
LLMSLHDLEISEICTVDPCHKFTWCLDACIREKFVDNKRARELQGFLDGVKKGQEQVLGD
LSMILCDPFAINTLALSTIRHLQDLVGQDTLPRESPDLLLLLRMLSLGQGAWDMIDSQVF
KEPKMEAELITKFLPMLMSFVVDDHTFNVDQKLPSEEKGPIPYPSTIPEAFTKFLQENRI
ACEIGLYYILHITKQRNKNAFLRLLPALVETFSDLAFSDIFLHLLTGNLTLLGDEFAVEE
FCTGLFDGFFLTACSRKENVHRHVLRLLLHLHHKVAPAKLESLQKALEPTKQSGEAVKEL
HNQLTEKLELRKPSPAEVTETPSMELPLPTVPTPASR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcggggctgcaggagctgggggtggccaacggcgaggatctcaaggagacgttg
accaactgcacggagccgctgaaggccatcgagcagttccagacagaaaatggggtcctg
ctgccctcgctgcagtcggccctgcccttcctggacctgcacggcaccccccggctggag
ttccaccagtcggtgttcgacgagctgagggagaaactgctggagcgaatctcagccatc
gccttggaagggaaggtggaggaaaggtacaagaagctggaagatctcctggagaaaagc
ttttccttggtcaagatgccgtccatacagcctgtggtaatgtgtgtcatgaagcacttg
cccaaggtgcctgagaagaagctgaagttagtaatggctgacaaggatttgtataaagca
tgtgcagtggaggtgaagcgccagatttggcaggataaccaggctctgtttggtgatgaa
gtatctccactgctgaagcaatatatcttggagaaagaaaatattctcttcagcaacgat
atttctgtcctgcacaacttcttcagtccatctcccaaagcaagacgtcagggagaggtg
gttcagaagctgactcagatgattgggaagaacgtgaagctctacgacatggtgttgcag
ttcttgagaaccttgttcctccggacaaggaatgtgcattactgcacgctgcgggcagag
ctcctgatgtcactgcatgacctggaaatcagtgaaatctgcactgttgacccttgtcat
aagttcacgtggtgccttgatgcctgcattcgggagaagtttgtggacaacaagagagct
cgggaattgcaaggctttctggatggagtgaagaaaggacaagagcaagttctgggggac
ttgtcgatgatcttgtgtgatccctttgccattaacaccttagccctgagcaccatcagg
cacctgcaggacctcgttgggcaggacaccttacccagggaaagcccagatctgctgctg
ctccttaggatgctgtctttaggacagggagcctgggacatgattgacagtcaagtcttc
aaggaaccaaaaatggaagctgaattgattacaaagttcttgcctatgctgatgtccttt
gtggtggatgatcacacattcaatgtagatcagaagctgccctcggaggaaaaggggccg
attccctaccccagcaccattcctgaggctttcaccaaattcttgcaggagaacagaata
gcttgtgagattgggctgtattatatccttcacataacaaaacagagaaacaagaatgct
ttcctcaggctcctgccagcactagttgagacgttcagtgacttggccttcagtgatata
tttctgcatctgctcactggtaacctcacactgctgggtgatgaatttgcagttgaagaa
ttctgcaccggtctcttcgatggcttctttctcactgcatgctcaagaaaggagaatgta
cacagacatgtactgagattgctgcttcatctgcatcacaaagtggcgcctgccaaatta
gagtctctccagaaggctttggaacccaccaaacagagtggggaggctgtgaaggagctt
cataaccagctcactgagaaactggagcttcgcaagcccagtcctgccgaagtgaccgag
actccctccatggagctgcccttgcccaccgtgcccacaccagcctcacgctga
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