KEGG   Lagopus muta (rock ptarmigan): 125702576
Entry
125702576         CDS       T09141                                 
Symbol
NELFB
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125702576 (NELFB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmut03021]
    125702576 (NELFB)
Transcription machinery [BR:lmut03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     125702576 (NELFB)
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 125702576
NCBI-ProteinID: XP_048821985
LinkDB
Position
19:2010168..2027480
AA seq 577 aa
MYAGLQELGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQSALPFLDLHGTPRLE
FHQSVFDELREKLLERISAIALEGKVEERYKKLEDLLEKSFSLVKMPSIQPVVMCVMKHL
PKVPEKKLKLVMADKDLYKACAVEVKRQIWQDNQALFGDEVSPLLKQYILEKENILFSND
ISVLHNFFSPSPKARRQGEVVQKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAE
LLMSLHDLEISEICTVDPCHKFTWCLDACIREKFVDNKRARELQGFLDGVKKGQEQVLGD
LSMILCDPFAINTLALSTIRHLQDLVGQDTLPRESPDLLLLLRMLSLGQGAWDMIDSQVF
KEPKMEAELITKFLPMLMSFVVDDHTFNVDQKLPSEEKGPIPYPSTIPEAFTKFLQENRI
ACEIGLYYILHITKQRNKNAFLRLLPALVETFSDLAFSDIFLHLLTGNLTLLGDEFAVEE
FCTGLFDGFFLTACSRKENVHRHVLRLLLHLHHKVAPAKLESLQKALEPTKQSGEAVKEL
HNQLTEKLELRKPSPAEVTETPSMELPLPTVPTPASR
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgtacgcggggctgcaggagctgggggtggccaacggcgaggatctcaaggagacgttg
accaactgcacggagccgctgaaggccatcgagcagttccagacagaaaatggggtcctg
ctgccctcgctgcagtcggccctgcccttcctggacctgcacggcaccccccggctggag
ttccaccagtcggtgttcgacgagctgagggagaaactgctggagcgaatctcagccatc
gccttggaagggaaggtggaggaaaggtacaagaagctggaagatctcctggagaaaagc
ttttccttggtcaagatgccgtccatacagcctgtggtaatgtgtgtcatgaagcacttg
cccaaggtgcctgagaagaagctgaagttagtaatggctgacaaggatttgtataaagca
tgtgcagtggaggtgaagcgccagatttggcaggataaccaggctctgtttggtgatgaa
gtatctccactgctgaagcaatatatcttggagaaagaaaatattctcttcagcaacgat
atttctgtcctgcacaacttcttcagtccatctcccaaagcaagacgtcagggagaggtg
gttcagaagctgactcagatgattgggaagaacgtgaagctctacgacatggtgttgcag
ttcttgagaaccttgttcctccggacaaggaatgtgcattactgcacgctgcgggcagag
ctcctgatgtcactgcatgacctggaaatcagtgaaatctgcactgttgacccttgtcat
aagttcacgtggtgccttgatgcctgcattcgggagaagtttgtggacaacaagagagct
cgggaattgcaaggctttctggatggagtgaagaaaggacaagagcaagttctgggggac
ttgtcgatgatcttgtgtgatccctttgccattaacaccttagccctgagcaccatcagg
cacctgcaggacctcgttgggcaggacaccttacccagggaaagcccagatctgctgctg
ctccttaggatgctgtctttaggacagggagcctgggacatgattgacagtcaagtcttc
aaggaaccaaaaatggaagctgaattgattacaaagttcttgcctatgctgatgtccttt
gtggtggatgatcacacattcaatgtagatcagaagctgccctcggaggaaaaggggccg
attccctaccccagcaccattcctgaggctttcaccaaattcttgcaggagaacagaata
gcttgtgagattgggctgtattatatccttcacataacaaaacagagaaacaagaatgct
ttcctcaggctcctgccagcactagttgagacgttcagtgacttggccttcagtgatata
tttctgcatctgctcactggtaacctcacactgctgggtgatgaatttgcagttgaagaa
ttctgcaccggtctcttcgatggcttctttctcactgcatgctcaagaaaggagaatgta
cacagacatgtactgagattgctgcttcatctgcatcacaaagtggcgcctgccaaatta
gagtctctccagaaggctttggaacccaccaaacagagtggggaggctgtgaaggagctt
cataaccagctcactgagaaactggagcttcgcaagcccagtcctgccgaagtgaccgag
actccctccatggagctgcccttgcccaccgtgcccacaccagcctcacgctga

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