Lagopus muta (rock ptarmigan): 125702650
Help
Entry
125702650 CDS
T09141
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04020
Calcium signaling pathway
lmut04080
Neuroactive ligand-receptor interaction
lmut04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125702650 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125702650 (GRIN1)
04082 Neuroactive ligand signaling
125702650 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125702650 (GRIN1)
Ion channels [BR:
lmut04040
]
Ligand-gated channels
Glutamate (ionotropic)
125702650 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Rap-GAP_dimer
DUF6724
Motif
Other DBs
NCBI-GeneID:
125702650
NCBI-ProteinID:
XP_048822157
LinkDB
All DBs
Position
19:572130..603928
Genome browser
AA seq
1070 aa
AA seq
DB search
MSAMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTS
GIHFGYPRAVAEPDLVTPSPVGKVTLIGTKAIGEESLSAPAAERGRSPRLAAPAPWRLVL
PACANQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTPCRMVPQECQRDRLAPW
SQDSPGKLPPHSERPSAHHHPSCTASPRHIIPTAPGGDACVPHRQLLQLE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatgcggctgctgctgctcgccctgctcttctcctcctcttttgcccgcgcc
ggctgtgaccccaagatcgtcaatatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagaggcacggcacctggaagctgcagctc
aacgccacctcggtcacgcacaaacccaacgccattcagatggctctctccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcacccacctgctcccaacgat
cacctaacaccaacacctgtatcatacacagctggcttctacaggattcctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcacg
gtcccaccatactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactgg
aatcacgtcattctgatagtcagtgacgaccacgaaggtcgtgctgcacaaaagaagctg
gagaccctcttggaggagagagagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggcagagaaagtgctgcagtttgacccc
gggaccaaaaacgtgacatcgcttctgctggaggctaaagagctggaggctcgtgtcatc
atcctctccgccagtgaggatgatgcggcaacagtgtacagatcagcagccatgctcaat
atgacgggctccggctacgtgtggctggtgggggaacgggagatttcgggcaatgccctg
cgctacgcccctgatggagtcatcggcttgcagctcatcaatgggaagaacgagtcagcc
cacataagcgacgcagtggcagtggtggcccaggctgtgcacgacttgtttgagaaggag
aacatcactgacccaccacggggctgtgtgggcaacaccaacatctggaagacggggccc
cttttcaagagggtgttgatgtcctccaagtattcggagggtgtcaccggacgggtagaa
ttcaatgaggacggggacaggaagtttgccaattacagcatcatgaacctgcagaaccgc
aaactggtccaggttgggatttacaacggtagcaatgtcttgaccaacgacaggaagata
atctggccagggggagaaactgagaaacctcaaggctatcagatgtcgaccaaattgaag
attgtaacgattcaccaagaaccctttgtatatgtgaagcccacacaagcagatgggacg
tgcagggaggaattcaccatcaatggtgaccctgtcaaaaaggtcttttgtacagggccc
aacgagaccatcccaggccggcccacagtggcactgtgttgctatggcttctgcatcgac
ctgctcatccgcctggctggtgtgatgaacttcacctacgaggttcatctggtggctgat
ggtaaatttggtacccaagagcgggtgaacaacagcaacaagaaggagtggaatgggatg
atgggggagttgctgagtggccaggcggatatgattgtagctcccctcaccatcaacaat
gagcgggcacagtacatcgagttctccaagcccttcaaataccagggtctcaccatcctt
gtgaagaaggaaatccctcgcagcaccctggattcgttcatgcagcccttccagagtaca
ctgtggttgctggtggggctgtctgtgcatgtggtggcagtgatgttgtaccttctagat
cgattcagcccatttggacggttcaaagtgaacagcgaggaggaggaggaagatgccctg
acactctcctcagccatgtggttctcctggggagtcctgctgaactccggcatcggagaa
ggtgctcctcggagtttttctgctcgtattctgggcatggtgtgggctggctttgctatg
atcattgtggcttcctatactgccaacctggctgccttcctggtgttggaccgtcctgag
gagagaattacaggcatcaatgacccccggctgcgcaacccctccgataagttcatttac
gccacggtgaagcagagctcggtggacatctacttccgacggcaggtggagctgagcacc
atgtaccggcacatggagaaacacaactatgagagcgcagccgaagccatccaggctgtg
cgagacaacaagctccacgccttcatctgggactcggcagtgctggagtttgaagcctcg
cagaagtgtgacctggtgacaacaggggaacttttcttccgctccggctttgggattggg
atgcgcaaggacagcccgtggaagcagaatgtctcactggccatcctcaagtcccacgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataag
gacgcgcggaggaagcagatgcagctggcgtttgcggccgttaatgtatggaggaaaaac
ctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcaccagc
gggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtccccc
gtcggcaaggtcacactcattggcacgaaagcaattggggaggaatcgttgtcagcgccc
gccgccgagcgcggccggtccccacggctcgctgcccccgcaccgtggcggctggtgctc
ccagcctgcgccaaccaggatagaaaaagtggtagagcagaacctgaccctaaaaagaaa
gccacttttaggtccatcacctccaccctggcctccagcttcaagagacgtaggtcctcc
aaggatacgccctgcagaatggtccctcaggagtgccagagagacaggctggcaccatgg
agccaagacagccccgggaagctgccaccccactctgaacgtcctagcgcccaccaccac
ccgagctgcacagcctctccgcggcacatcatccccaccgccccaggaggagatgcatgt
gttccccataggcagctcctgcaactcgaatag
DBGET
integrated database retrieval system
