Lagopus muta (rock ptarmigan): 125702742
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Entry
125702742 CDS
T09141
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125702742 (CACNA1B)
04020 Calcium signaling pathway
125702742 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125702742 (CACNA1B)
Ion channels [BR:
lmut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125702742 (CACNA1B)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125702742
NCBI-ProteinID:
XP_048822373
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All DBs
Position
19:2203155..2468116
Genome browser
AA seq
2364 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDGRAASEGPIQQGTAP
AETSSGSSYNMLKRAAIKKSKNDLIHAEEGEDHFTDICSVGSPFARASLKSGKNESSSYF
RRKEKMFRFFIRRMVKAQSFYWIVLCVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGL
FLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLR
IFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFRDETPTT
NFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVF
LAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANMSIAAFVKQTRGT
VSRSSSVSSVNSPKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTL
HIRPDMKTHLDRPLVVEPRGEGRNNISKLSPVDMQEVEQIKVSSTDGAEAPRKHHRHRDK
EKLGEQEKGDVTKDENGESGINNKEERHRQHRSHSKEVEGGSKEGKGERIRGLEGGKRHH
RRGSVEEGAEKEHRRHRTHRHSAERQGKEGNGTINGARSERRTRHRGGSRSGNREGEPGS
KGENGEEPHRRHRFRSRALSTYDSVEKENREKEGETAEKEHQNHQPKENQCEIEASGSVS
IPVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETTVIPMN
NVEFESKAEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIV
IALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLW
NILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSL
KNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPR
EWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVY
FVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQS
FQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECV
LKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADNFINLSFLRLFRAARLIKLLRQ
GYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALNDETSINRHNNFRTF
LQALMLLFRSATGEAWHEIMLSCLSSRACDPLSGLTKNECGSDFAYFYFVSFIFLCSFLM
LNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMYEMLRHMSPP
LGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEIKLASGGVKQHQCDA
ELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQVHQPPG
GLCQPGPVSLFHPLKATLEQTQPSAFSNAKAFLRQKSSASLNNGGTLPAPEGGIKESSSW
GTQRTQDVFYETRTPAFERGHSEEIPIERVVEMREISPTLANGEHQPGLESQGRAASMPR
LAAETQPIPDTSPMKRSISTLTPQRPHPMHLYEYSLERVPTDQVHHHHHHRCHRRKEKKQ
KSLDRTTHQLADGEAVAQSGESSSKDKKQERGRSQERKQHSSSSSEKQRFYSCDRYGSRD
RSQPKSADQSRPTSPNGGPEQGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLPQTPLTPR
PSITYKTANSSPVHFGTSPGGLPPFSPGRLSRGLSEHNALLRGDQQPPPAAVARIGSDPY
LGHRDAADSPVSAAPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQARRVPNGYHYTLG
LNTGPGTGTRGRSYYHEADEDDWC
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttcggggatgatctaccaacacgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaagccggccaaaggatgtataagcagtcg
atggctcagagggcccggactatggctctctacaatcccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatatgcc
aagagaataacagaatggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggagcaacatttgccggatggagacaagacacctatgtcagag
agattggatgacactgagccgtactttattggaatattttgttttgaagctggtataaag
atcattgctctggggtttgtttttcacaaaggctcttacctccgaaatggttggaacgtg
atggatttcgttgtggtcctcacagggattctagcaactgctgggaccgacttcgacctg
cggaccctgcgagccgtccgtgtgctgcggccgctgaagctggtgtcgggaatcccaagt
ctgcaggtcgtcctcaagtccatcatgaaggcaatggtgcctctgcttcagattgggctg
ctcctcttctttgccatcgtgatgtttgccatcatcggcttggaattctacatggggaag
tttcacaaaacctgcttctctaatgagacaggtgaagaggtgggagattttccttgtgga
gaggagcctcctgccaggcagtgcgagagtgggaccacctgcagggaatattggcaaggg
cccaactatggcatcaccaactttgacaacatcctctttgctgtgctcaccgtcttccag
tgcatcaccatggagggatggaccgacatcctctacaatacaaatgatgctgcaggaaat
acctggaactggctttacttcatccctctcatcatcatcggctctttcttcatgctcaac
ttggtgctgggcgtcctatcaggtgaatttgccaaagaacgagagagggtagaaaaccgt
cgagctttcctgaaactccgtaggcagcagcaaatagaacgggagctaaatggatatttg
gagtggatcttcaaagcagaggaagtcatgctggctgaggaagacaagaacgcagaagag
aaatctcctctggacgggagggccgcctcggaagggccgattcaacaaggcacggcaccg
gcagagactagcagcggcagcagctacaacatgttgaaaagagccgcaataaagaagagc
aaaaacgacctgattcatgctgaagaaggtgaggaccatttcacagacatttgctccgtt
gggtctccttttgcccgtgccagtttgaagagtgggaagaatgagagctcatcctacttc
aggaggaaagagaaaatgttccgcttcttcatccggcgcatggtgaaagcccagagcttc
tactggatcgtgctctgcgtggttgccctcaacacgctctgcgtcgcgatggtgcactat
gatcagccagagaaactcaccactgctctgtatttcgccgagtttgtttttctgggtctg
ttccttactgagatgtctttgaagatgtatggactgggaccaagaaattactttcattcc
tcattcaactgctttgactttggggtcattgtgggaagcatctttgaagtcatctgggct
gcagtgaaacctggtacctcgtttggcatcagcgtgctgagagctctgcggctgctgcgg
attttcaaagtcaccaaatactggaactccctgaggaacctcgtggtctccttgctgaac
tccatgaagtccatcatcagtttgctctttctgctgttcctcttcattgtggtgtttgct
ctgctggggatgcagctctttggagggcagttcaattttagagacgaaacaccaaccacg
aatttcgatacttttccagctgccatcctcacagtgttccagatcctgactggggaggac
tggaacgcagtgatgtaccatggcatagagtcacagggcggtgtccactcggggatgttc
tcctccatttacttcatcgtcctgacgttgtttggtaactatacactcctgaatgtcttc
ttggccatcgccgttgacaacctggccaatgcccaagagctgaccaaggatgaggaggag
atggaggaagccaccaatcagaagctcgccctgcagaaggccaaggaggtagcagaagtc
agccccatgtctgcagccaacatgtccatagccgcttttgtaaagcaaactcgaggtact
gtatctcgcagctcgtcagtctccagcgtaaattcacccaagcagcagaactcctccaaa
tccaagtcggtttgggagcagcgaaccagccagattcggatgcacaatttccgagccagc
tgtgaggctctgtacaatgaactggaccctgaggagcgggtgcgctacgccacgacccta
cacatccgtccagacatgaagacccacttggatcggccactggtggtggagccaaggggt
gaagggaggaacaacatcagcaagctgagccctgtggatatgcaggaggtggagcagatc
aaggtcagctctactgatggagcagaagctcctcggaagcatcaccggcatcgggataag
gagaaactgggagagcaagagaaaggtgatgtgaccaaagatgagaatggggaatctggc
atcaacaataaggaggagaggcacaggcagcacagaagtcacagcaaggaagtggaaggg
ggcagcaaggaagggaaaggtgagcgcatcaggggcctggaaggagggaagaggcaccat
cgccgggggtcggtggaagaaggcgctgaaaaggagcaccggaggcatcgcacgcaccgg
cactctgcggaacggcaaggcaaggagggcaatgggaccatcaatggggccaggagcgag
cggagaacccggcaccgtggagggtcgaggtctgggaaccgggaaggagagcccggctcc
aagggtgagaatggagaggagcctcacagacggcaccggttcaggagcagggcgttgtcg
acgtacgattcggtggagaaggagaacagggagaaggaaggggagactgctgagaaggag
caccagaatcatcagcccaaggagaatcagtgtgagattgaggccagtgggagtgtgagc
atccctgtgcacacccttcccagcacctatctgcagaaagtgccggagcagccagaagat
gctgacaaccagaagaacgtgacacgcatgattcagccgcctctggacaaaaccaccact
gtgaacatccctgtcaccatcactgccccgccaggagaaaccaccgtcattcccatgaac
aacgttgagtttgaaagtaaagcggaagagaagaaggatgttgatgacttgacaaaaaat
gggcctaaaccaatcttgccttacagttccatgttcatcctaagtcctacgaacccgatc
cggcgtctcttccactacatcgtcaacctgcgctacttcgagatggtcatcctcatcgtc
attgccctcagcagcattgccctggcagcagaagaccccgtccaagcagaatcgccgagg
aacgatgctctgaagtacttggattatatttttacgggtgtctttaccttcgagatggtg
atcaagatgattgacctggggctgttactccaccctggctcctatttccgtgacctgtgg
aacatcttggacttcattgtggtcagtggggccttggtggcatttgccttctcaggaacc
aaaggcaaggacatcaacacgatcaagtcgctgcgggttctgcgggtcctgcgaccactg
aagaccataaaacggctgccaaaactaaaggctgtctttgactgcgtggtgaattccctg
aagaacgtcctcaacatcctcattgtttatatgctcttcatgttcatctttgctgtcatt
gctgtgcagctcttcaaaggcagattcttctattgcaccgatgagtcgaaagagctggag
aaggattgcaggggtcagtaccttgactatgaaaaaaatgaggtggaggcgcagcccaga
gaatggaaaaaatacgagttccattacgacaacgtgctgtgggctctgctgacacttttc
actgtctccacaggagaagggtggccaactgtgctgaagcactcagtggatgctacctac
gaggaacagggtcccagccctggctaccgaatggaaatgtctatcttttacgtggtgtat
tttgttgtcttcccttttttctttgtgaacatctttgtggcgttaatcataatcaccttc
caagagcaaggagataaagtgatgtcagaatgcagcctagagaaaaatgagagggcctgc
attgacttcgccataagtgccaagccgctgacccgctacatgcctcagaacaagcagtca
tttcagtacaagatgtggaaattcgtggtgtcccctccctttgagtattttatcatggtc
atgattgcactcaatactattgttctcatgatgaagttctatgatgctccagaagcatac
gaagaaatgttgaaatgcctgaatattgtctttacatccatgttttcaatggagtgtgtg
ctgaagatcattgcctttggtgtgctgaactatttccgagatgcctggaatgtctttgac
tttgtaacagtgttgggaagtattactgatattttagtaacagagattgcggacaacttc
atcaacctcagcttcctgcggctcttcagggcagcaagacttatcaaactccttcgccag
ggttacactatccgcatcttgctctggacatttgtgcagtcatttaaggccttgccttac
gtgtgtcttctcattgcaatgctcttcttcatctatgccattattggcatgcaggtattt
ggaaacattgcactaaatgatgaaacctccatcaatcggcacaataatttccgtaccttc
cttcaagccctgatgcttctgttcaggagtgccacaggggaagcctggcatgagatcatg
ctgtcatgcctgagcagcagggcctgcgacccgctctctggcctcaccaagaacgaatgc
ggcagcgacttcgcctatttctacttcgtgtcgttcatcttcctctgctccttcctgatg
ttgaacctgtttgtggctgtaatcatggacaactttgaatacttgacaagagactcctcc
atccttgggccccatcatttggatgagtttgttcgtgtctgggctgaatacgacccagct
gcctgcgggcgcatcagttacacagacatgtatgagatgctgagacacatgtccccacct
ctaggccttggaaagaaatgccctgctcgcgttgcctataagcgcctggtgaggatgaac
atgcccatctcacccgaggatctgacagtccacttcacctccacgctgatggccctgatc
cgcactgctctggaaatcaagcttgcctcagggggtgttaagcagcaccagtgtgatgct
gagctgagaaaggagatctctctggtttggcccaacctgtcccagaagacactggatttg
ctggtgcctcctcacaaacctgatgagatgactgtggggaaggtctacgcagcgctcatg
atatttgacttctacaaacagaacaagaacagcagggaacaagtccaccagcctcctggg
gggctctgccagcccggaccggtgtcactcttccaccccttgaaggccactttggagcaa
acccaaccctcagccttcagcaatgcgaaggcattcctgcgccagaaaagctcagcctcg
ctcaacaacgggggcacattgccagccccagagggtgggatcaaagagtccagttcctgg
gggacccaacgcacccaggatgtgttttatgaaaccaggacaccagcttttgaacgaggc
cactcagaggagatccccattgaacgggtggtggaaatgagggaaatcagccccacgctt
gccaatggagagcaccaaccagggctggagagccagggtcgggcagcttccatgccgcgc
ctggctgccgaaactcagcccatcccggacacgagccccatgaagcgctctatctccacg
ctgaccccgcagcgtccacatcccatgcacctctatgagtactccctggaacgcgtgccc
acggaccaggtgcatcaccaccaccaccaccgctgccaccggcggaaagagaagaagcag
aagtccttggacaggaccacacatcagctggccgatggggaagctgtggcccagtctggt
gaatcttcttccaaggacaagaagcaggagcgtggacggtcccaagagaggaagcagcac
tcttcctcctcttcagaaaagcagcgcttctactcctgtgatcgctatggcagccgggac
cgatcccagcccaagtctgctgatcagagcaggcccacttcgcccaatggtgggcctgag
caaggtccccacagacagggcagtggttcggttaacgggagccccttgctgtcgacatct
ggtgctagtaccccctgccggggtcggaggcagctcccgcagacccccctgaccccacgc
cccagcatcacttacaagaccgccaactcctcgcccgtccacttcggcacgtcgccgggc
ggcctcccgcccttctccccgggccgcctgagccgcgggctgtctgagcacaacgcgctg
ctgcgtggggaccagcagccgcccccagccgcggttgcccgcatcggctccgatccttac
ctgggccaccgcgacgccgccgacagcccggtgagcgcagcgcccgaggacacgctcacc
ttcgaggaagccgtggccaccaactcggggcgttcctccaggacttcttacgtctcctcc
ttgacctcccagtctcaccaagcacgccgggtgcccaatggctaccattacacgctgggg
ctcaacacggggcccggcactggcaccaggggacggagctactaccacgaagccgacgag
gacgactggtgctag
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integrated database retrieval system
