Lagopus muta (rock ptarmigan): 125702811
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Entry
125702811 CDS
T09141
Symbol
NLE1
Name
(RefSeq) notchless protein homolog 1 isoform X1
KO
K14855
ribosome assembly protein 4
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmut03009
]
125702811 (NLE1)
Ribosome biogenesis [BR:
lmut03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125702811 (NLE1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Aladin
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR41
NLE
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
PAC11
Beta-prop_NOL10_N
Tricorn_2nd
Beta-prop_Nup120_160
eIF2A
TRM82_WD
RMC1_N
Ge1_WD40
Beta-prop_SPT8
Beta-prop_WDR75_2nd
WD40_RFWD3
PD40
WDR54
Beta-prop_NWD2_C
FAD_binding_9
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
125702811
NCBI-ProteinID:
XP_048822509
LinkDB
All DBs
Position
20:complement(3120564..3132857)
Genome browser
AA seq
482 aa
AA seq
DB search
MAASMEPTEDVERLLIQFRDEAGEPLGSPFDVPVSITPDKLQLVCNALLQQDEPVPLAFF
FHDAEIVVSLEKTLAGQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFS
PTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLW
DPATGSQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTQMGRCDKILT
GHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRT
GAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKK
PLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWS
ADSRLLVSGSSDSTLKVWNAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW
RR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgagcatggagcctacagaggacgtggagcggctcctgatccagttccgcgat
gaggccggcgagccgctgggctcccccttcgacgtgcccgtcagcatcaccccggataag
ctgcagctggtgtgcaacgccctcctgcagcaggatgagccggtgcctttggccttcttc
ttccacgatgccgagattgtcgtttcgctggagaagacattggcagggcaagcagtggag
acagagaaggttctcgacatcatctaccagccgcaggccgtgttcagggtgcgggcagtg
acacgctgcaccagctccctggagggacacaccgaggccgtcatctccgttgccttcagc
cccacgggaaagtacctggcgagcggctctggagatacaacagtccgcttctgggacctc
agcacagagacgccgcagttcacagccaaaggtcacaggcactgggtgctcagcatcgcc
tggtcacctgatggcaagaagctggcctcaggctgcaaaaacagccagatatttctctgg
gacccagccacaggcagtcagatcggccgcgttctcactggccattccaaatggatcacg
tgtctgtgctgggagccgctccacataaacccagagtgccgctacctggccagtgcttcc
aaggatggcagcatccgcatctgggacacgcagatgggcaggtgtgacaaaatcctcacg
ggccacacgcagtccgtgacttgtgtgaagtggggcggcgatggcttgctctactcctcc
tcccaagacagaactatcaaagtgtggagaagccaggatggcatcctgtgccgcaccttg
caaggccacgctcactgggtgaacaccatggcccttagcactgattacgttcttcgcact
ggtgcctttgaacctgctgaagccaccattaacccacaggatatgagtggctccttggca
gaactgaaggacaaggcacagcagaggtatgataaagtcaggggccagggaccagaaagg
ctcgtctcaggttcagatgatttcacactgtttctttggaggccagcagaagataagaag
ccactggagagaatgacaggtcaccaggcattgattaaccaagtcctcttctcaccagac
acccggataatagccagtgcttcctttgacaaatcaataaagctctgggagggcaggaca
ggaaagtacctgacatcactgagaggacacgtctcagccgtgtatcagatcgcttggtca
gccgacagccgcttgctggtgagtgggagcagcgacagcacactgaaggtctggaatgct
gagacaaagaaactggccattgatcttcccggccatgcagatgaggtttttgcaacagat
tggagcccagacggacagagggtagcgagtggagggaaggataagtgtttacggatatgg
cgcagatag
DBGET
integrated database retrieval system
