KEGG   Lagopus muta (rock ptarmigan): 125702857
Entry
125702857         CDS       T09141                                 
Symbol
STX1A
Name
(RefSeq) syntaxin-1A isoform X1
  KO
K04560  syntaxin 1A
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    125702857 (STX1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lmut04131]
    125702857 (STX1A)
Membrane trafficking [BR:lmut04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    125702857 (STX1A)
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 ATG17_like Spectrin_Anc-1 Prominin Laminin_II GNVR Lzipper-MIP1 YtxH ARM_ECM29 Ferritin PspA_IM30 EcoEI_R_C Translin Lge1 CC4_CEP85 ETRAMP Relaxase_C Med9 ANIS5_cation-bd PoNi_N DUF16
Other DBs
NCBI-GeneID: 125702857
NCBI-ProteinID: XP_048822607
LinkDB
Position
20:9719243..9767729
AA seq 288 aa
MKDRTGELRAAKDSDDDDEVTVSVDRDRFMDEFFEQVEEIRGFIDKISENVEEVKRKHSA
ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
STLSRKFVEVMSEYNATQTDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFSSG
IIMDSNITKQALNEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHS
VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTFGGIFG
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaaggaccgcaccggggagctgcgcgccgcgaaggacagtgatgacgatgacgaagtc
accgtcagtgtggacagggaccgcttcatggacgagttctttgaacaggtggaagaaata
cgagggttcatcgataaaatctcagagaacgtggaggaagtgaagaggaagcatagtgcc
attcttgcttcacccaaccctgatgagaaaacaaaggaggagctggaagagctcatgtca
gacatcaaaaagacagcgaacaaagtgcgctccaagctaaagagtattgagcagagtatc
gaacaagaggaaggactgaacaggtcatctgctgacctgaggataaggaaaactcagcac
tcgacgctgtcacgcaagtttgtggaggtgatgtctgaatacaacgccacgcagaccgac
taccgggagcgctgcaagggcaggatccagcggcagctggagatcactggcaggaccacc
accagtgaggagctggaggacatgctggagagcggcaacccggccatcttctcctctggg
atcattatggattccaacatcaccaagcaggctctgaacgagatcgagacgcgacacagt
gagatcatcaaactggagaacagcatccgagagctgcatgacatgttcatggacatggcc
atgctagtggagagccagggtgagatgatcgaccgcatcgagtacaacgtggaacactct
gtggactacgtggagcgagctgtgtccgacaccaaaaaagcggtgaagtaccagagcaaa
gccagacggaagaagatcatgatcatcatctgctgcgtgatcctgggtatcgtcatcgcc
tccacctttggcggcattttcggctag

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