Lagopus muta (rock ptarmigan): 125702857
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Entry
125702857 CDS
T09141
Symbol
STX1A
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125702857 (STX1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125702857 (STX1A)
Membrane trafficking [BR:
lmut04131
]
SNARE
Syntaxin (Qa)
Stx-PM
125702857 (STX1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
ATG17_like
Spectrin_Anc-1
Prominin
Laminin_II
GNVR
Lzipper-MIP1
YtxH
ARM_ECM29
Ferritin
PspA_IM30
EcoEI_R_C
Translin
Lge1
CC4_CEP85
ETRAMP
Relaxase_C
Med9
ANIS5_cation-bd
PoNi_N
DUF16
Motif
Other DBs
NCBI-GeneID:
125702857
NCBI-ProteinID:
XP_048822607
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Position
20:9719243..9767729
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AA seq
288 aa
AA seq
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MKDRTGELRAAKDSDDDDEVTVSVDRDRFMDEFFEQVEEIRGFIDKISENVEEVKRKHSA
ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
STLSRKFVEVMSEYNATQTDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFSSG
IIMDSNITKQALNEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHS
VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTFGGIFG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgcaccggggagctgcgcgccgcgaaggacagtgatgacgatgacgaagtc
accgtcagtgtggacagggaccgcttcatggacgagttctttgaacaggtggaagaaata
cgagggttcatcgataaaatctcagagaacgtggaggaagtgaagaggaagcatagtgcc
attcttgcttcacccaaccctgatgagaaaacaaaggaggagctggaagagctcatgtca
gacatcaaaaagacagcgaacaaagtgcgctccaagctaaagagtattgagcagagtatc
gaacaagaggaaggactgaacaggtcatctgctgacctgaggataaggaaaactcagcac
tcgacgctgtcacgcaagtttgtggaggtgatgtctgaatacaacgccacgcagaccgac
taccgggagcgctgcaagggcaggatccagcggcagctggagatcactggcaggaccacc
accagtgaggagctggaggacatgctggagagcggcaacccggccatcttctcctctggg
atcattatggattccaacatcaccaagcaggctctgaacgagatcgagacgcgacacagt
gagatcatcaaactggagaacagcatccgagagctgcatgacatgttcatggacatggcc
atgctagtggagagccagggtgagatgatcgaccgcatcgagtacaacgtggaacactct
gtggactacgtggagcgagctgtgtccgacaccaaaaaagcggtgaagtaccagagcaaa
gccagacggaagaagatcatgatcatcatctgctgcgtgatcctgggtatcgtcatcgcc
tccacctttggcggcattttcggctag
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