Lagopus muta (rock ptarmigan): 125702880
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Entry
125702880 CDS
T09141
Symbol
SMYD4
Name
(RefSeq) SET and MYND domain-containing protein 4
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
125702880 (SMYD4)
Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
125702880 (SMYD4)
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
SET
TPR_1
TPR_12
ANAPC3
zf-MYND
TPR_10
TPR_7
TPR_NPHP3
TPR_MalT
TPR_14
Motif
Other DBs
NCBI-GeneID:
125702880
NCBI-ProteinID:
XP_048822657
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Position
20:4500888..4507940
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AA seq
797 aa
AA seq
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MALPVEEWRQNVARRWAALEPALRERLAAASLGEALRVGCGLFGPEVAALRRLCGRVRTD
KESAAARFYREEGNRRFGRCRYSEAARLYSQAAAHEPPRSPEVALCFANRSAALFHLGHF
EVCLEDIARAESHGYPDRLLPKVLLRKAECLLRLGRLQDATDALTAVENKVTVDGIMTSS
THLTLLKKLNQLKTEIHQGSCSEPSRGAHDDIQRESEIWEENGSISGASSSLSLNFNTER
GRHLVASQDILPGQSLLKEKAFVCVLCPVEGDSLLLQNSSETVWDTQVTNADLYCHRCLK
QLLASVPCCGCSYAKYCSQNCADVAWEQYHRTECPLGALLLVLGVFCHVALRTVLLAGFS
EVSRLVEWSHDDSNKDLCNAEAGDKHPSEALDTRAGTKGIPGCNDDGQYQSSYRAVFNLL
PHVEKHSPEHKFLCMLSIIAICKKLQETGLEAAVLNRESSIMGSEQKMYGKTSEELSPEL
MIIAEAMLRHVLQLQCNAQAVTVMQELESGDGAVVNKKPVRLATAFFPVLSLLNHSCSPN
ISVSFSGTVATVRASQSIPSGREIFHCYGPHHCRMRVAERQQLLSQYFFECRCQACLDEL
ESDVESVSMRNSFCCPNCQASMQGEEMLCCSNEACAFSVSRGRLSRRLLDLQQQMEKALE
LLRDSKADEAIRMLLKCQMDARNFLSPEHLLMGELEDHLAQIYAALGKWQEAARHLERSI
QLVEMHHGPSSVEMGHELFKLAQILFNGLAVSEALSTIQRAEEILSVHCGPQSTQIQELQ
EMKTCLLELPRSILQRT
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgccggtggaggagtggcggcagaacgttgcccggcgctgggccgctctggag
ccagcgctgagggaacggctggcggcagcatcgctgggcgaggcgctacgggtgggctgc
ggcctctttgggcccgaggtggcggccttacggcggctgtgtggccgggttcgcacggac
aaggagtcagcagccgctcgcttctaccgggaggagggaaaccggcggttcggccgctgc
cgctacagcgaagccgctaggctgtactcgcaggccgcggcccacgaacctccccgcagt
cctgaggtggccctgtgcttcgccaaccgctccgcagccctgttccatctcgggcacttt
gaggtttgtttggaagatattgccagggctgaaagtcatggctatccagataggctgctg
cccaaggtcttgctgcggaaggctgaatgcctgctgcgtttggggaggttacaggatgca
acagacgccctcactgcagtggaaaataaagtgactgtagatgggattatgactagttct
acccaccttacgctactgaaaaagttaaaccagctgaagactgaaatacatcaggggagc
tgttcagaaccttcacgaggagcacatgatgatattcaaagggagtcagagatctgggaa
gagaatggcagtatttcaggtgcatcttcatctttgagcttgaatttcaatacagagaga
ggacgtcacttggtggcctcccaggacatcctgccaggacagagcctgttgaaagagaag
gcttttgtctgtgtgctctgcccagttgaaggggatagccttcttctacagaacagcagt
gaaacggtgtgggatactcaagtcactaacgcagatctttattgccaccgttgtctgaag
cagctcttagcctctgtcccatgctgtggatgcagttatgcaaagtactgcagccaaaac
tgtgcagatgtggcatgggagcagtaccacaggacagagtgccccttgggagcactgctg
ctcgtgttaggggtcttctgccatgttgccttaaggactgttctactagcaggattttca
gaggttagcaggctggtggagtggtcgcatgatgatagcaacaaggacctttgcaatgct
gaggcaggagataaacatcccagtgaggcactggatacaagagctggaacaaaaggtatc
cctggttgtaatgatgatggccagtaccagagttcttaccgagctgtgttcaaccttttg
ccacatgttgagaagcatagtcctgaacataagttcctttgcatgctgagtataatagct
atatgcaaaaaattgcaagaaactggtctagaggctgctgttctgaacagggagtcatct
ataatgggatcagaacagaagatgtatggaaaaacatctgaggaactgtctccagaactg
atgattatagcagaagcaatgctgaggcatgtgttgcagctacagtgtaacgcacaagcg
gtcactgtaatgcaggagttagagtctggagatggtgctgttgtaaataagaagcctgtg
cgcctggccacagccttctttcctgtcctcagccttctgaaccattcgtgcagccccaat
atcagtgtgtcattcagtgggacagttgccactgtcagggcatctcagtcaatcccaagc
ggccgggagattttccattgctacgggcctcatcactgtagaatgagggttgctgagaga
caacagcttctcagtcagtatttctttgagtgccgctgtcaggcatgccttgatgagtta
gagtctgatgtcgagagtgtgtccatgagaaactcattctgctgccctaactgccaggct
tcaatgcagggggaagaaatgctttgttgttcaaacgaagcttgtgcgttctcagtcagc
agagggagattgtcacggcgcttactggaccttcagcagcaaatggagaaagcattagag
ctgctaagagacagcaaggctgatgaagctatcagaatgctcctgaagtgtcaaatggat
gctagaaacttcttgtcaccagagcatttgctgatgggagagctggaggaccatctggca
cagatctatgctgctcttggaaagtggcaggaagcagccagacacttggagaggagtatt
cagcttgtggaaatgcatcatgggccatctagtgtagaaatgggtcatgaactcttcaaa
ctggcacaaattctcttcaatggattggcagtttctgaagctctgagcacaattcaaaga
gcagaggagattttatcagtgcactgtggtccgcagagtactcagatccaggaactacaa
gagatgaagacctgtctgttagagcttcccagaagcatccttcagaggacttaa
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