Lagopus muta (rock ptarmigan): 125702928
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Entry
125702928 CDS
T09141
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03020
RNA polymerase
lmut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125702928
09124 Replication and repair
03420 Nucleotide excision repair
125702928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125702928
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125702928
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125702928
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125702928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
125702928
NCBI-ProteinID:
XP_048822760
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All DBs
Position
20:5749814..5751272
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AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcctccggctttcgagtccttccttctcttcgaaggcgagaaaaagatcacc
atcaacaaggacaccaaggtgcccaacgcctgtctgttcaccatcaacaaggaggaccac
acgctggggaacatcatcaagtcgcagttactgaaggaccctcaggtgttgtttgcaggt
tacaaggtcccacaccccctggaacacaaaatcatcatccgtgtccaaacaacgccagat
tacagcccccaggaggctttcaccaacgccatcacagatctgatcagtgagctgtccctc
ctcgaggagagattcagggttgccatcaaagacaaacaggaaggaatcgagtaa
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