Lagopus muta (rock ptarmigan): 125702936
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Entry
125702936 CDS
T09141
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125702936 (VPS53)
Membrane trafficking [BR:
lmut04131
]
Protein recycling
Others
EARP complex
125702936 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
125702936 (VPS53)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
IFT74
Sec8_N
GrpE
Syndetin_C
NBD94
TP_0481_C
hAT-like_RNase-H
GbsR_C
MCPsignal
COG3_N
COG5_N
DUF5654
Snf7
Tropomyosin
XhlA
Motif
Other DBs
NCBI-GeneID:
125702936
NCBI-ProteinID:
XP_048822785
LinkDB
All DBs
Position
20:complement(2938425..2987479)
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AA seq
831 aa
AA seq
DB search
MEEDELELAAGLEAALELAPAVQAAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI
DEVVNKIRLKIRKLDDSIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPSQGTKRPGGPSNVLRDA
CLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGRMFPQEWCMTERIAVEFCHVTRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGCTLADGTVKKPEAPPPSTNPFLEDETGAETDEIVIEKSDTDKPKKPKVPDNPFHGIV
SKCFEPHLYVYIESQDKNLSELIDRFVADFKAQGPPKPNVDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTITSLLKEKEGSEV
AKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDASLVERINLTGETDTFSIVISNS
IQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRK
YFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKA
PASYTRIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKRS
EQSSMLELFRQRLPAPPSGVENSSSLSLSTPTPEQESSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggacgagttggagctggcggctgggctggaggcggcgctggagttggctcct
gccgtgcaggccgccatcgagcaggtatttcccagccaagaccccctggacagagcagat
ttcaatgctgtggagtatattaacactctctttcccactgagcaatctttggcaaacatc
gatgaagttgtcaacaaaatcagattgaaaataaggaagttggatgacagcattcgaact
gtagtgagaggacagaccaacgtgggtcaggatggcaggcaggccctggaagaagcccag
aaagccattcagcaactctttggtaaaattaaggatattaaagacaaggctgaaaaatca
gaacaaatggttaaagaaatcacacgggacatcaagcagctggatcatgccaagcgccat
ctgaccacctccatcaccaccctcaaccacctgcacatgctggcagggggagtggactca
ctggaggctatgaccagaaggagacaatacggggaagttgccaaccttctacaaggcgtt
gtgaatgtgttggagcacttcaacaaatacatggggattcctcagattcgacagctttct
gaaagggtgaaggcagcacagaatgaattaggacagcagatcctggctgactttgaggaa
gcctttccttcccaaggtacaaagagacctggtggacccagcaatgtcctgcgtgatgcg
tgtctcgtcgccaatgtcctggatcccagaatcaagcaggaaatcatcaagaaatttatt
aaacaacacctctcagagtatctggtccttttccaggaaaatcaagatgttgcctggctg
gataagatagacaggcgctacgcgtggatcaaacgtcagctggtggactatgaggagaag
tacgggcgcatgttcccccaggagtggtgcatgacggagcgcatcgctgtggagttctgc
cacgtcaccaggacagagcttgccaagataatgcgtacaagagcaaaggaaattgaagtg
aaattgcttctgtttgcaatccagaggacaaccaactttgaaggacttctggctaagcgc
ttctcaggctgcactctggctgatggcacagtgaagaagccagaagcacctcctccttcc
accaacccatttctagaggatgaaactggggcagagacggatgagattgtaattgaaaaa
agtgatacagacaaaccaaagaagccgaaagtcccggacaatcctttccatggcattgtt
tccaagtgcttcgagcctcacctttatgtgtatatcgagtcccaagacaagaatctcagc
gagctgatcgacaggtttgtggctgacttcaaggcccaagggcctcccaagcccaacgtg
gatgaaggaggagccgtgctgcccagctgtgctgacctctttgtgtactataagaagtgc
atggtgcagtgctcccagctcagcacaggtgaacccatgatagccctgaccaccatcttc
cagaagtaccttcgggaatatgcctggaaaatcctgtctggcaacctgcccaagacaacg
agcagcagcggcgggctcaccatcactagtttgctgaaagaaaaggaaggctctgaagta
gccaagtttactttagaagagctctgcctcatttgcagtatccttagtactgcagagtac
tgcttggcaacgactcagcagttggaagagaaactcaaagaaaaagtggatgcaagtctg
gtggagagaatcaacctaacaggagagacggacaccttcagcattgtgatttccaacagc
atacagctgctagtgcaggacttggacgcagcctgtgaccctgccctgactgctatgagc
aagatgcagtggcagaacgtggaacatgttggtgaccagagtccttatgtcacctcagtg
attctccacatcaagcagaacgtccccatcatccgtgacaacctggcatccaccagaaag
tatttcactcagttctgtataaagtttgcaaactctttcattcccaagttcatcaaccac
ctctttaagtgcaagcctatcagcatggtgggagcagaacagctgctgctggacactcac
tctctgaagatggtcctcctggatctgccctccatcgggtcccaagtggtgagaaaggct
cctgccagctacacaaggatagtggtgaaaggcatgactcgggctgaaatgatcctgaag
gtggttatggccccgcatgagcccccagttgtgtttgttgacaactacatcaagcttctt
gctgactgcagcacagacactttccagaagatactggacatgaagggcctgaagaggagc
gagcagagcagcatgctggagcttttccgccagcgcctcccagcacctccttctggggtg
gagaacagcagctcactctcactgagcaccccaacccctgagcaggaatcctcccggata
cggaaactggagaaactcatcaaaaaaagactctga
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