Lagopus muta (rock ptarmigan): 125702947
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Entry
125702947 CDS
T09141
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125702947 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125702947 (RNF43)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125702947 (RNF43)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125702947 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
KIAA1549
zf-ANAPC11
DUF5305
zf-C3HC4_3
TMIE
DUF4381
Motif
Other DBs
NCBI-GeneID:
125702947
NCBI-ProteinID:
XP_048822807
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All DBs
Position
20:9298578..9351353
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AA seq
829 aa
AA seq
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MSGGPQLQLAVLWPWLLMASLQAGLGRTGPALAAAVESERAAAQKAIIRVIPLKVEPIVL
EGEFASVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSVQQQTMQAIRQLATR
KYQARCRQASRWDSASSCSSAPVCAICLEEFTEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARDSVDQATVAGSRLAPRDMEPGRRLHLFRQHPGHSLYHLPHPYPQRNLRS
FPSEPAHSNPFFHSPELSQLDFGTIHYMPYRPASSLPACGHASPLASGLRGQQHPSPPAC
GQPPHRTCSLQPTPPCLGLTAALAQRQHRAPIPRRGVSHGHQHNSSGSGESYLTEHSGYL
ADGPGSDSSSGPCHGSSSDSMLNCTDISLQGIHGSCSTFRSSLSSDYDPFVYCSSDGPTM
DNGPERQRALRETRPRSLDLMVPGGAAPAKAQVLNHIHYHHHQHHHYRREVECTPGRAGS
GPGQRKSRYSGAKVGFHSARTQKRAEKSHHSQQPLESRTELQEAPPVGQPACAQQGREPP
HASSASPNRLDFGVDANRQSGAAGTSPVLLPQRHSLQSRHHRRKRKCPLELDPALLPEDS
ALPKASDAHIPHGHPAGHRCSPEVQPLIPSSPMPCSTGSRPLWKCLVPQSSSELKKQEEG
MSGREGNRAVPAGFSGTGTPRHSLHLHCPAQQCGQGSEEEVQDVREHSV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtggcccccagctgcagctggcggtcctctggccttggctgctgatggcttct
ctgcaggcagggctcggccgcaccgggccggcgctggcggcagccgtcgagtcggagcgg
gcagcggcgcagaaggccatcatcagggtgatcccgctgaaggtggagcccatcgtgctg
gagggggagtttgccagcgtggccgaggtcactcccgccgagggaaagctgctccagtcc
cacccgctgtccctgtgcaacaccagtgaggatgaacacacagagtcaggattcatcacc
atcgtcaagcttgagcagccggatcgggatcccaacccgtgcctgtccctggctaacaag
gcaaagctggcaggggagcgtggagctcgtgcaatcctttttgacattaccgatgatgaa
agtgctgccgatcagctgagaaagcccagaggtctgagtcaacccgtggtgctgatcagg
ggccacgatgctgagctgctcatgggcgtcgtgaacaagaacagagaggcccatgtgaag
atagaggtcaaggagccaccagcttggcctgactacgacgtgtggatccttctcactgtg
gtcagcactgttgtcgtcatcattttgatttttgtcgtccgcacaaagtgccagctgaac
aggacacaggactcggtacagcagcagaccatgcaggccatcaggcagctggccacgcgc
aagtaccaggccaggtgccggcaggcctcgcggtgggactcggccagcagctgcagctcg
gccccggtctgtgctatttgcttggaggagttcactgaaggccaggaactgcggatcatc
tcatgctcccacgagtttcaccgggagtgtgttgacccctggctgcagcaacaccacacg
tgtccactttgcatgttcaatattcttgcccgagactcagtggaccaggccacggtggca
ggctctaggctggctcctcgggacatggaacccggacggcggctgcaccttttccgccag
cacccaggacattccctttaccaccttccacatccctaccctcagaggaatctcaggagc
ttcccttcagagccagcccacagcaaccccttcttccactctccagagctctcccagctg
gattttggcacaatccactacatgccatacaggccagccagctccctgcccgcctgcgga
cacgcatcccccctggcctccggtttgcggggccagcagcaccccagccctccagcgtgt
gggcaacccccccacaggacgtgctccctgcagcccacaccgccctgcctggggctgacg
gcagccctggcacagcggcagcaccgggcgcccatcccgcgccggggggtcagccacggg
caccagcacaacagcagtggctccggggagagctatctcacggagcacagtgggtacctg
gcagacggtccaggcagcgactccagctcggggccctgccacggttcttccagtgactcc
atgttgaactgcacagacatcagcctgcagggcatccatggcagctgctccactttccgc
agctccctcagcagcgactacgacccctttgtgtactgcagctcagatgggcccaccatg
gacaacgggccggagcggcaacgggcgctgagggagacgcgacccaggtccttggacctg
atggtgcccggcggtgccgctccagccaaggcccaggtgctcaaccacatccactaccac
caccaccagcaccaccattacagaagggaggtggaatgcacacctggccgggctggctcg
ggccctgggcagcgcaagtcccgatactctggggctaaggttggctttcacagtgctcgg
acgcaaaagagggctgagaagagccatcactctcagcagccactggaaagcaggacagag
ttgcaggaggctcctccagtgggacagccagcctgtgcccagcaaggtcgggagcccccg
catgcctcctccgcttctcccaacaggttggacttcggtgtagatgccaacagacagtcg
ggagcagcaggcacgtcccctgtgctgctgccccagagacacagcttacagagccgacat
caccgaaggaaaagaaagtgtcccctggagctcgatcccgctctcctgcccgaggattca
gccttgcccaaagcctctgatgctcacattcctcacggccaccctgctggccaccgctgc
tcgcccgaggtccaacctctgatcccaagctctcccatgccctgcagcacgggctcccgg
ccgctgtggaagtgtttggtaccacagtccagctcagagctgaaaaagcaggaggaaggg
atgtcaggacgggagggaaaccgcgcggttcctgctggtttctcaggaacaggcacccca
aggcacagtctccacctgcactgcccagctcagcagtgtgggcagggatctgaagaggag
gtccaggatgtccgtgaacactcagtttaa
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