Lagopus muta (rock ptarmigan): 125702972
Help
Entry
125702972 CDS
T09141
Symbol
SRSF1
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03040
Spliceosome
lmut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125702972 (SRSF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125702972 (SRSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmut03041
]
125702972 (SRSF1)
Spliceosome [BR:
lmut03041
]
Common components
Common spliceosomal components
SR proteins
125702972 (SRSF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
125702972
NCBI-ProteinID:
XP_048822841
LinkDB
All DBs
Position
20:complement(1221076..1224631)
Genome browser
AA seq
248 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
YRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
HSRSRSRT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagggggcgtgatccgcggcccagccggcaataacgactgccgcatctacgtg
ggtaacctgccccccgacatccgcaccaaggacatcgaggacgtcttctacaaatacggc
gccatccgcgacatcgacctgaagaaccgccgcggcgggccgcccttcgccttcgtggag
ttcgaggaccccagggacgcggaggacgccgtctacgggcgggacggttacgattacgat
gggtatcgcctccgcgtggagttccctcgcagcggccggggcaccggcagaggaggcggc
ggcggcggagggggcggagccccgcggggcaggtacggccccccgtcccggcgatcggag
tacagagtgattgtatcggggctgcctccaagtggaagttggcaggatttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgttttccgagatggcactggtgtcgtg
gagtttgtacggaaggaagatatgacctacgctgtgcgaaagctggataacactaagttt
agatctcatgagggagaaactgcctacatccgtgttaaagttgatggtccaagaagtcca
agctatggaagatctcggtcacgcagccgtagtcgtagcagaagccgtagtcgaagcaac
agcagaagccgcagttattccccacggagaagcagaggatctccacgctactctccccgc
cacagcagatcccgatctcgtacataa
DBGET
integrated database retrieval system
