Lagopus muta (rock ptarmigan): 125702976
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Entry
125702976 CDS
T09141
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04142
Lysosome
lmut04144
Endocytosis
lmut05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125702976 (CLTC)
04142 Lysosome
125702976 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125702976 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125702976 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmut04147
]
125702976 (CLTC)
Membrane trafficking [BR:
lmut04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
125702976 (CLTC)
Exosome [BR:
lmut04147
]
Exosomal proteins
Proteins found in most exosomes
125702976 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
125702976
NCBI-ProteinID:
XP_048822846
LinkDB
All DBs
Position
20:complement(2623125..2652580)
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKKECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaatactgccgatccgcttccaggagcacctccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacgatggagtcagacaaattcatctgcata
agagagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
ccaattcgaagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattaaaagctggaaaaacacttcaaatatttaacattgaaatgaagagcaaaatgaag
gctcacacgatgacagatgacgtcaccttctggaagtggatctccctgaatactgttgcc
cttgtaacggataatgcagtctaccattggagtatggagggagagtcccagcctgtgaaa
atgtttgatcgccactctagtcttgctggctgccagatcatcaactaccgtactgatgcg
aagcagaaatggctgctgctaacaggcatatctgcacagcaaaaccgtgttgtgggagca
atgcagctctattctgtagacagaaaagtttcacagccgatcgaggggcatgcagctagc
tttgcacagttcaagatggaaggaaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagttgcacatcatcgaggttggcacaccaccaactggcaat
cagccattcccaaagaaagcagtggatgtcttctttcctcctgaagcacagaatgacttt
cctgttgcaatgcagatcagtgacaagcatgatgtggtgtttctgataacaaaatatggc
tatattcacttgtatgacctggaaactggcacctgtatttacatgaacagaatcagtgga
gagaccatatttgttactgcacagcatgaagcaacagctggaattataggagtaaacagg
aagggacaagtgttatcagtctgtgtggaagaagagaatattattccctacattacaaac
gtgctgcagaatcctgacctagctttacgaatggctgtccgcaacaacctggccggagct
gaggaactttttgccagaaaattcaatgcactgtttgcacaagggaactattcagaggca
gcaaaagtggcagctaatgccccaaagggaattctgcgtactccagacaccatacgccgt
ttccagagtgttccagcacaaccaggacagacttcccctttactccagtattttggtatt
ctgcttgaccaagggcaactgaataagtatgagtctctggaactttgcagaccggtgctt
cagcagggacgcaagcaacttctggaaaaatggttaaaagaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtagaccctacactagcacttagtgtctatctg
agagccaatgttccaaacaaagtcatccagtgttttgctgaaacaggacaagtccagaag
atcgttttgtatgctaagaaggttgggtatactccagactggattttcttgctgaggaac
gtaatgagaatcagccctgatcaaggacagcagtttgcccaaatgcttgttcaagatgaa
gagcctcttgcagacataacacaaattgtggatgtttttatggaatataacttaattcag
caatgtacagccttcttactggatgcactgaagaataatcgcccctcagagggtcccctg
caaacacgtttacttgagatgaacctcatgcatgcaccccaggttgcagatgctatcctg
ggaaaccaaatgtttactcattatgatcgggctcacatagctcagctgtgtgagaaagct
ggcttgctgcagagagcactcgaacacttcacagacttgtatgacatcaagcgtgcagta
gttcacactcatcttctcaatcctgagtggctagtgaactactttggctccttgtcagta
gaagattctctggagtgtctgcgtgctatgttgtctgccaacatccgccagaacctgcag
atctgtgtgcaggtagcttcaaaataccacgaacagctgtcaacacagtcacttattgag
ctgtttgagtccttcaagagctttgaaggtttgttctatttcctgggctccattgtaaac
tttagccaggatccagatgtgcacttcaaatatattcaagctgcatgcaagacaggacag
attaaagaagtagaaagaatctgcagggaaagcaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagctaccactcatcattgtgtgtgatcgc
ttcgactttgtccacgacttggtgctgtacttatatagaaataatctccaaaaatatatt
gagatttatgtacagaaggtgaatccaagccgcctgcctgttgttattggaggactgctt
gatgtggattgctctgaagatgtgataaagaaccttatccttgtagtgagaggccagttt
tcaactgatgaacttgttgcagaggttgagaaaagaaacaggctgaaactacttctgccc
tggctggaggcaagaattcatgagggttgtgaggagcctgcaacacacaatgcattggcc
aaaatatacattgatagcaacaacaacccagaaagatttttgcgtgagaatccttactat
gatagccgagttgttggcaagtactgtgagaagagggacccgcacctggcctgcgtggct
tatgaacgtggacagtgtgatttggagctgatcaatgtgtgcaatgagaactctctcttc
aaaagcctttcccgctacttagttcgccgtaaagaccctgagctgtgggccagtgtgctg
ctggaaagcaacccgtacagaagaccactaattgaccaggttgtgcagactgcactgtca
gagacccaggatcctgaggaggtgtctgttactgtgaaggccttcatgactgcagatctt
cccaatgagcttattgaactgttggagaaaatagttctcgataactctgtattcagtgag
cacaggaacctgcagaacctgctgattctcacagctattaaggctgatcgcacccgtgtc
atggaatacatcaaccgcctggataactatgatgctccagacatagccaatatagctatc
agcaatgagctgtttgaggaggcgtttgccatcttcaggaagtttgatgtgaacacatca
gctgtacaggtattaatagagcacattggaaacctggatcgtgcatatgaatttgctgag
cgctgcaatgagcctgctgtgtggagtcagctggctaaagcacagcttcagaaagggatg
gtaaaggaagcaattgattcatacattaaagcagatgatccttcctcgtacatggaagtt
gttcaagctgccaatgccagtggaaactgggaagaactggtgaaatatcttcagatggca
cgcaagaaggcccgggaatcatatgtggaaacagaattaatctttgctcttgctaaaaca
aaccgtctggcagagctagaagaatttatcaatggacccaacaatgcacatatccagcaa
gttggtgatcgctgttatgatgaaaagatgtatgaagctgctaagctgttgtataacaat
gtgtccaactttggccgtttagcctcaactttagttcacctaggggaataccaggcagct
gtggatggtgctcggaaagcaaacagtactcgcacatggaaagaggtctgctttgcttgt
gttgatggaaaagaattccgcctggcccagatgtgtggacttcatattgtagtgcatgca
gatgagttggaagagcttatcaattattaccaggatcgtggctactttgaagagctgata
actatgttggaagcagcacttggacttgagcgagcacacatggggatgtttacagagtta
gcaattctttactccaagttcaaaccacagaagatgagggagcacttggaactgttctgg
tccagagtcaacatccccaaggttctgagagctgcagaacaagcccatctgtgggctgaa
ttggtgttcttgtatgataagtatgaagaatatgataatgccataatcacaatgatgaat
cacccaacagatgcttggaaagaaggacaattcaaagatatcataactaaggtggccaat
gtggagctgtactacaaagcagttcaattctatttggaattcaaacctctgttgctcaat
gatctgctgatggtgttgtcccctcgacttgaccatactcgtgctgttaccttcttcaca
aaggttaaacagttacccctggttaaaccttacttgcgctctgttcaaaatcacaacaac
aaatcagtgaatgagtccctgaacaacctcttcattattgaagaagactaccaggccctt
aggacttctatagatgcttatgacaactttgacaacatttctcttgctcaacgtttggag
aaacacgagctgatagagttccgaaggattgctgcatatctgttcaaaggaaacaatcgc
tggaagcagagtgtggaactctgtaagaaggacagactgtacaaggatgcaatgcaatat
gcttcagaatccaaagatactgagttggcagaagaattgttgcagtggttcttgcaggag
aacaagaaagaatgctttggtgcttgtctctttacctgctatgatcttttaaggcctgac
gttgtcttggaaacagcgtggaggcacaacatcatggactttgccatgccatactttatt
caggtcatgaaggagtacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcatcggagtccttgagaaaggaagaggagcaagctactgaaacacaacctattgtt
tatggtcagccacaactcatgttgacagcaggacccagcgttgcagttcctccacaagca
ccttttggctatggttacactgcaccaccctacgggcaaccgcagccaggctttgggtac
agcatgtaa
DBGET
integrated database retrieval system
