Lagopus muta (rock ptarmigan): 125703015
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Entry
125703015 CDS
T09141
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmut03009
]
125703015 (DDX52)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125703015 (DDX52)
Ribosome biogenesis [BR:
lmut03009
]
Eukaryotic type
90S particles
Helicases
125703015 (DDX52)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
CC2D2AN-C2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125703015
NCBI-ProteinID:
XP_048822915
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All DBs
Position
20:1291713..1298931
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AA seq
604 aa
AA seq
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MEAQELFRRLGAGARFDVQRFGRDARRFGVIRGSGGTPENLDFFGRKEGGASLGSAGKQE
DGAGRKDVEMAGKRKRTAESGQRKRKKIQETVSMPELSESGGIMWMSSLEAKVKDTKDNK
KPTAEKLERLRREKINRFRNQHRINIQGTDLPDPIATFDQLQKEYKVHPKVIENIQAAGF
QVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFCIPLLTHLKQPMNKGFRALIISPTRE
LAGQTHRELVKLAEGTGFRIHMIHKASEAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP
AIDLTSVEWLVVDESDKLFEDGKSGFREQLASIFLACTSHVVRRAFFSATFARDVEEWCK
LNLDSIVLVTVGARNSAAETVEQELLFVGSETGKLTAMRELVKKGFAPPVLVFVQSIERA
KELFHELIYEGINVDVIHADKTQQQRDNVVHSFRAGKIWVLICTALLARGIDFKGVNMVI
NYDLPTSAVEYIHRIGRTGRAGHAGKAVTFFTEDDKPLLRSIASVIQRAGCPVPDYIKHF
PKLQSKQKKKFIKKPLTREAICTTPQCFLKKDRRKKRTAKENVKEKKKVKEVTNNSNLKT
ASTS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcaggagctgttccgccgcttgggcgccggggctcgtttcgacgtacagcgc
ttcgggcgggacgcgcggcgcttcggggtgatccggggaagtggcggcacaccggagaac
ctcgacttcttcgggcgcaaggagggaggagcctcactggggtccgcggggaagcaggag
gatggagcgggaagaaaggatgtggagatggcggggaagaggaaaaggacggcagaaagt
ggccaaaggaaaagaaaaaagatacaagaaacagtgtcaatgccagagctgtcagaaagc
ggtgggataatgtggatgtcctctctggaagcaaaagtcaaagatacaaaagacaacaaa
aaacctactgcagaaaagcttgaacgtttaagaagggagaagataaaccgtttcaggaat
caacacaggattaacattcaagggacagatcttcctgacccaattgccacgtttgatcaa
cttcagaaggaatacaaagtccaccccaaagtcattgagaatattcaagctgctggcttc
caggttccaacaccaatccagatgcaggccattccagtcatgcttcatggccgagaactt
ctagcttctgctcctactgggtctggaaaaacactggcattttgtattcctctcttaaca
cacctgaagcaacccatgaacaaaggattcagagccctgatcatatctcctacccgggaa
cttgctggccagacacatcgggagttggtgaaattggctgaggggacaggcttcaggatc
catatgatccacaaggcctctgaagcagcaaagaagtttgggcccaagtcgtctaagaag
tttgatatactagttactactccaaacagactcatctatttactgaaacaagatcctcca
gcaatagacttgaccagcgtggagtggctggtggtggatgagtcagacaaactgtttgaa
gatggaaagtcaggattccgagagcaattggcctccatcttcctggcatgcacatcccat
gtggtgagaagagcctttttcagtgcaacctttgcgcgtgatgtggaggagtggtgtaaa
ctcaaccttgacagtattgttctggtgactgttggtgcaagaaactctgcagcagagaca
gtggaacaagagctgttgtttgttggatcggagacaggaaaactgacagcaatgagagag
cttgttaaaaagggttttgctcccccagtccttgtttttgtacagtctattgagagggct
aaagagcttttccatgagcttatttatgaaggcatcaacgtagatgtcatccatgcagac
aaaactcaacagcagagagataatgtagtgcacagtttcagagctgggaagatctgggtg
ctcatttgcacagctttactagctcgagggattgatttcaaaggagttaatatggtcatt
aattacgatttgccaacaagtgcagtggaatacatccacagaataggtcgtactggaaga
gcaggacacgcagggaaagcagtcactttctttacagaagatgataagcctttattacga
agcatagccagtgttatccagcgagctggctgtcctgtgccagactacataaagcacttt
cccaaactccaaagcaaacagaagaagaaattcattaagaaaccactaacgagagaagca
atttgtaccactcctcagtgcttcttaaaaaaagacagaagaaaaaagagaactgcaaag
gaaaatgttaaggaaaagaagaaagttaaggaagttacaaataacagtaatttgaagact
gcttcaacaagctga
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