Lagopus muta (rock ptarmigan): 125703016
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Entry
125703016 CDS
T09141
Name
(RefSeq) ATP-dependent RNA helicase DDX25-like isoform X1
KO
K18656
ATP-dependent RNA helicase DDX25 [EC:
5.6.2.7
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125703016
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125703016
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125703016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SMC_N
Motif
Other DBs
NCBI-GeneID:
125703016
NCBI-ProteinID:
XP_048822918
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All DBs
Position
20:complement(9967545..9995445)
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AA seq
542 aa
AA seq
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MCWPSSVHNLNLSLERDDEKDVLMCLVDNSEHKHEIHACWIDLEAQTWMMGRFPKAFFQH
FGGLLASERMLCGLSAVLRGCPPATVTAAAPPPVTWVGTEKEPLRTGEDEESEEEEREDL
AESSLLNKLLHTSLVENSHHVEVLQQDPSSPLFSIRTFEELHLKKELLQGVYTMGFNRPS
KIQANALPILMAHPPQNLIAQSQSGTGKTAAFVLAMLSRVRGTERYPQCLCLAPTYELAL
QIGHVAEKMGRFCNDIRVTYAVQGNRVSPGTVLEEQIVIGTPGTMLDWCFKRRLLNMRRI
CMFVLDEADIMIDTQGFSSQSIRIQRALPKNCQMLLFSATFKENLWKFALQIVSRPIIIK
LRQEELTLTNIRQYYFVCKNWEQKYEALCNLYGSITIGQAMIFCQTRRSADWLSVKMIQD
GHQVAMLTAELSIVQRADVIQRFRDGKEKVLITTNVCARGIDVAQVTIVVNFSLPVNRQK
QPDFETYLHRIGRTGRFGKRGIAFNMVDSHSTHLVRCIEEHFQTKIKRLDPDCMDKLEEL
EN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtgctggccaagctcagtccataacttaaacttgagcctggaaagagatgatgagaaa
gatgtcttgatgtgtttagttgacaacagtgagcacaaacatgagatccatgcctgctgg
attgatctggaagcacagacctggatgatgggaagatttccaaaggcatttttccagcat
tttgggggacttctggcctcagagcgtatgctctgtggcctctctgcggtgctgagaggc
tgccctcctgcaacggtgacagcagcggctccacccccagtaacctgggtggggacagag
aaggagcccctccgcaccggcgaagatgaggagagcgaggaagaggagagagaggacctg
gctgagagttcactgcttaacaagctgctccacacctcgctggtagagaacagccaccac
gtggaggtgctgcagcaggacccctcctctccgctcttctccatcagaaccttcgaggag
ctgcacctgaaaaaggagcttctgcagggcgtgtacaccatgggcttcaacaggccatcg
aagatccaggctaatgctctgcccatcctgatggcgcatccaccccaaaatctgattgcg
cagagccagtctgggacgggcaaaacagcagcgtttgtcctggccatgctgagcagagtg
agaggcactgagaggtacccgcagtgcctttgtctggctcccacttatgagctggccctg
cagattggccatgtggcagagaagatggggcggttctgcaatgacatcagggtcacctat
gctgtgcagggcaacagagtgtccccaggcaccgtgctggaggagcagattgtcattggc
acgccaggcaccatgctggactggtgcttcaagcggagactgctcaacatgcggaggatc
tgcatgtttgtgctggatgaggctgacatcatgattgacacgcagggattctcctcccag
agcatccgcatccagagggctctccccaagaactgccagatgctgcttttctccgccacc
ttcaaggaaaatctctggaaatttgccctgcaaattgtctccaggcccatcatcatcaag
ctgcgacaggaggagctcactctgaccaacattaggcagtactattttgtctgcaagaac
tgggagcagaagtatgaggccctctgcaacctctatggcagcatcaccattggccaggcc
atgatcttctgccagacccgccggagtgcagactggctctcggtgaagatgattcaggat
gggcaccaagtggccatgctgacagcagagctgtccatcgtgcagagagctgatgtcatc
cagaggtttcgtgatggcaaggagaaggttctcatcaccaccaatgtctgtgcgagaggg
attgatgtggcccaagtcacgattgtggtgaacttcagccttcccgtcaaccgtcagaag
caaccagattttgagacctacttgcaccgcatcgggcgcacagggcgcttcgggaagagg
ggcattgccttcaatatggtggacagccacagcacgcacctcgtgcgctgcatcgaggag
catttccagactaagatcaagaggctggacccagattgcatggacaagcttgaggagctg
gaaaactga
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