KEGG   Lagopus muta (rock ptarmigan): 125703087
Entry
125703087         CDS       T09141                                 
Name
(RefSeq) claudin-3-like
  KO
K06087  claudin
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03272  Virion - Hepatitis viruses
lmut04382  Cornified envelope formation
lmut04514  Cell adhesion molecule (CAM) interaction
lmut04530  Tight junction
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    125703087
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    125703087
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    125703087
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    125703087
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:lmut03037]
    125703087
   04147 Exosome [BR:lmut04147]
    125703087
Cilium and associated proteins [BR:lmut03037]
 Other cilia and associated proteins
  Stereociliary proteins
   125703087
Exosome [BR:lmut04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   125703087
  Exosomal proteins of colorectal cancer cells
   125703087
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 CdpA_N TMEM37 TMEM_230_134 DUF4064 DUF7541
Other DBs
NCBI-GeneID: 125703087
NCBI-ProteinID: XP_048823073
LinkDB
Position
20:9212914..9214084
AA seq 214 aa
MSMGLEIGGLTLSVLGWLCSIICCALPMWKVTAFIGNNIVTAQIIWEGLWMNCVVQSTGQ
MQCKVYDSMLALPQDLQAARALLVVAIVLAVLGLMVAIVGAQCTRCVEDETTKAKITIVS
GVIFLLSGIITLIPVSWSANAIIRDFYNPLVLDAQKRELGSSLYVGWAASALQLFGGALL
CCSCPPKDERYMSSKVAYSAPRSAVTSYDKRNYV
NT seq 645 nt   +upstreamnt  +downstreamnt
atgtctatggggctggagatcggggggttgaccctgtcggtgctgggctggctgtgcagc
atcatctgctgcgcgctgcccatgtggaaggtgacggccttcatcggcaacaacatcgtg
acggcgcagatcatctgggaagggctgtggatgaactgcgtggtgcagagcacggggcag
atgcagtgcaaggtgtacgactccatgctggccctgccgcaggacctgcaggccgcccgc
gcgctgctggtggtggccatcgtgctggccgtgctgggcctgatggtggccatcgtgggt
gcccagtgcacgcgctgcgtggaggacgagaccaccaaggccaagatcaccatcgtctcc
ggcgtcatcttcctgctctccggcatcataaccctcatccccgtctcctggtcagccaac
gccatcatccgggatttctacaacccgctggtgctcgacgctcagaagcgggagctgggc
tcgtcgctttacgtgggctgggcggcctccgcgctgcagctcttcgggggggccctgctt
tgctgctcctgccccccaaaagacgagaggtacatgagcagcaaggtggcttactccgcc
ccgcgctccgccgttaccagctacgacaagaggaactatgtgtga

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