Lagopus muta (rock ptarmigan): 125703130
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Entry
125703130 CDS
T09141
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125703130 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmut01009
]
125703130 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125703130 (NCOR1)
Protein phosphatases and associated proteins [BR:
lmut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125703130 (NCOR1)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
125703130 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
125703130
NCBI-ProteinID:
XP_048823159
LinkDB
All DBs
Position
20:3401617..3457992
Genome browser
AA seq
2534 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPTHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQATQLLQQQ
QQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLESKRPRLEQVSDSH
FQRVSAATVLPLVHPLQEGLRSADIKKDPGFGGKHEGPSSPISGQPCGEDQNASPSKLSK
EELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIVQI
IYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNH
ARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQER
FQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKFI
NMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVLYY
YLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKAEKADKKDEEKKDEE
EKDEKEESKENTKEKDKTEVATEETEEREQATPRGRKTANSQGRRKGRITRSMTNEAAQA
NAAAAAATEEPPPPLPPPPEPSSSEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGT
KSEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIEA
SNEEENPEDSEGAENSSDTESAPSPTPAETAKPAEETPSESAAPKMTTEAAAEQESTVKP
AASTSPSVTSQSVSTAESQTSEPQVKEEINTEAEEPMEVDSRSHPVEAKPVLNLPVHTKV
EPVETEMRLPENIQVKIESDTKEREVEKPKEKSEPEEMDYSLSQQVNSARQESHSDNDSS
ATCSADEEVDGEPDRQGIFRESKPSLLNPAGSILVSPTIKQGQMDLQQLHHRAAVIPPMV
SCSPCTVPVGTPVSGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRSSVSPCGTSKSPN
VEWEGKPVAYMPYAEVKRAIEQEAQVQTTAARSASPYRLSPREVNKASPQPDMNAARYSV
PPVLQPAPHQVITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGTPG
TYLTSHSQASYTQETAKPSVGSISLGLPRQQESAKSASLPYIKQEEFSPRSQNSQPEGLL
VRAQHEGVVRGTTTIQEGSITRGTPTNKVSVETIPSLRGSITQGTPALSQSGIAADALLK
GTITRLATEDSSPEKCREEASAKGHVIYEGKSGHILSYDAIKNVREGTRSPRTAHEISLK
RSYDTMEGNIKQGMSMRESPVSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTPRAT
SESFEEGLKYPKQIKRESPPIRAFEGAITKGKPYDGVTTIKEMGRSIHEIPRQDLLSQES
CKTPEIVQTARPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLPRGMPQLEMVP
ENVKVVERGKYEDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPGIYDDTNARRT
PVNYQSPMSRSSPMMNRVSEAGISSGKSANHERKNTLTPTQRESVPAKSPVPGVDPVVAH
SPFDPHHRGATPEVYRSHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQLYA
MENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTILVP
HPGGTSTPPMERITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAAANAEREREREREKE
RERERERERERERERERERERITSVPAELYLRPGTEQPGRPGSHGYVRSPSPSVRSQENI
LQQRPSIFQGTNGTSVITPLDPAAQLRIMQLTPGAPSITQGLPASRYNTAADALAALVDA
AASAPQMEVAKAKDTKHEGTRIEENVGRRSAVVTEQQQIEQKTLEVEKRAVQCPYTSANF
SGGKSQGQSSTVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDKD
ARDRGSQSSDSSSSLSSHRYEAPGDAIEVISPANSPIPTQEKLQPYQQETPKPSQAEGDP
NRQYEGTIHRYRAQQEPPPSPQQPPPPSSQAEGMAHVPRTHRLITLADHICQIITQDFAR
NQAASQASLQPPTTTFQNSTPAPTPVSTRAKTSNRYSPESQSQPVHHQRPGARVSPENLS
DKSRGRPGKSPERSHVSSEPYEPISPPQVPVVHEKQENILLLSQRAEPTEQRTDSRSPGS
MSYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDADMATAQPGTEIFNLPAVTTSGAV
SSRGHSFADPASNLGLEDIIRKALMGNFDDKSEDHGVVMSQSIAVAPGNSSAVGSASNET
RREEANPSPNSGGGVSKQKLIGKSNSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHRQT
PVWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTSIACAPPSMSQATTHQQNRIWEREPAP
LLSAQYETLSDSDD
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggctaccctcctaaccaaggagcattcagcacagaacagagtcgttac
cctacccactctgtccagtacaccttccccagcacccgacaccagcaggaatttgcagtt
cccgattatcgctcgtctcacctggaagtcagtcaggcaacacaactcttgcagcagcag
cagcaacagcagcagcttcggcgccggccttctttgctttcagaatttcacccaggctct
gacaggcctcaggaaaggagaactggatatgaacagcagtttcatccaggtccatctcag
acagatcatgattcactggaatctaagcgaccacgtcttgaacaagtttctgattcccat
tttcagcgtgtcagtgctgctactgtcttgcctttagtacatcctctgcaggaagggttg
agatctgcagatattaagaaggacccaggttttggaggaaagcatgagggaccatcttct
ccaatttctggtcaaccgtgtggggaggaccagaatgcttcaccttcaaagctgtcaaag
gaagaattgatacagagcatggaccgcgtggatcgtgagattgcgaaggttgaacagcaa
atccttaagctgaagaaaaagcaacaacaactcgaagaagaagctgctaaaccaccagag
ccagagaggcctgtctcccctcctccagtggaacagaagcaccgcagtattgtccaaatt
atttatgatgaaaatcggaaaaaagcagaagaagctcacaagatttttgaaggtcttggt
cccaaagttgaactgccactttacaaccaaccatcagacacaaaagtctaccatgaaaac
atcaaaacaaaccaggtgatgaggaaaaagctaatactgttttttaaaagaagaaatcat
gcaaggaaacaacgggaacagaaaatctgccaacgctacgatcagctgatggaagcatgg
gagaaaaaagttgacaggatagaaaataatccacgcaggaaagctaaggagagcaaaaca
agagagtactatgagaaacaatttccagaaatccggaagcaaagagaacagcaagaacga
tttcagagagttggtcaaagaggggctggactttcagcaactattgctagaagcgagcat
gagatttctgaaatcattgatgggctttctgagcaggagaataacgaaaaacaaatgcgt
cagctctcagtcattcctcccatgatgttcgatgcagaacagagaagagtgaagtttatt
aatatgaatggtctgatggaggatcccatgaaagtttataaggacagacaattcatgaat
gtctggacggaccacgagaaagagatttttaaagaaaagtttgtccaacatcccaagaac
tttggtctaattgcttcctacctggaacgaaagaatgttcctgactgtgtactctattat
tacttgactaagaaaaatgaaaactataaagcccttgtgcgaaggaattatggtaaacgc
agaggaagaaaccagcaacaaattgctcgtccttctcaagaggaaaaagtagaagaaaag
gtagaagaggaaaaagcagaaaaagcagacaaaaaagacgaggaaaagaaagatgaggag
gaaaaggatgagaaggaggaatctaaagagaataccaaagaaaaggacaaaactgaagtt
gccacagaggaaacggaggaaagggagcaggccactcctaggggccgcaaaactgccaat
agccaaggtcgtcgtaagggcagaatcaccagatcaatgacaaatgaagctgcacaagca
aatgctgctgcagctgcagccactgaagagccaccaccgcctcttccacccccaccagaa
ccttcttcttcagagcctgtggagacatcccgctggacagaagaagaaatggaagttgct
aagaagggccttgtggaacatggccgcaactgggcagcaattgccaaaatggttgggaca
aaaagtgaagctcagtgtaaaaacttctacttcaactataaaaggagacataacctggac
agtctccttcaacagcacaaacagaagtcctcacgaaggccccgtgaagagcgagatgta
tcacagtgtgagagtgtagcttcgactgtgtcagctcaggaggatgaagacatcgaagca
tctaatgaagaagagaatccagaggacagtgaaggtgctgaaaatagttctgatactgaa
agtgctccatctccaactccagcagaaactgctaaaccagctgaagaaactccatctgag
agtgctgctccaaaaatgaccactgaggcggcagcagaacaggaatctactgttaaacct
gcagccagcacatctccctctgtaacatcccaaagtgtatcaacagctgaaagtcagacc
tctgagccacaggttaaggaagaaataaatactgaagctgaagaacctatggaggttgac
agtagaagccatccagttgaagctaagcctgtgcttaatcttccagtgcataccaaagtt
gaacctgtagagactgaaatgaggctaccagaaaatattcaagtaaaaatagagagtgat
accaaagagagagaggtggagaaacccaaggagaagtcagaacctgaagaaatggattat
agtttgtcacaacaggttaactcagcaagacaagaatcccattcagataatgattcgagt
gccacctgtagtgctgatgaggaagttgatggagagcctgacagacaaggtatcttcagg
gagtcaaagccctcattgttaaacccagctggatcaatactggtgtcacctacaataaag
caagggcagatggacctacaacagcttcaccaccgagcagctgtcataccacctatggtt
tcttgcagtccctgtactgttcctgttggaacaccagtgagtggttatgctctctatcaa
cggcacattaaagcaatgcatgagtcagcactgctggaggagcaacgccagaggcaggaa
cagctggacatggagtatcgaagctctgtgagcccgtgtggcacttccaaaagccctaat
gttgagtgggaaggaaaaccagtggcctatatgccctatgctgaggtcaagcgagcaata
gaacaggaagcacaagtgcaaactacagcagcaaggtcagcatcaccatacaggctgtct
ccaagagaagtcaataaagcctctcctcagcccgatatgaatgcagctcgctatagtgtc
ccaccagttctccagcctgctcctcatcaagtaataaccaatattcctgaaggagtccgc
cttcctacaaccagacctaccagaccaccaccaccactcattccatcctctaaaacaagt
gtgccatcagaaaaaccttctttcattatgggaggctcaatctcacaaggaacacctggc
acttacttaacatctcacagtcaagcttcctatacgcaagaaacagcaaagccatcagtg
ggttccatatcacttggactgccaaggcagcaggagtcagccaaatctgcttccctgcct
tacatcaaacaagaagaattttctcccagaagtcagaattcccaacctgagggactcctg
gtcagggcacagcatgaaggtgttgttcgaggcaccacaaccatacaggagggaagtata
acacgaggaactccaaccaataaagtttctgttgagaccattccttctttgagaggctcc
ataactcagggtacaccagctctgtcccagtctggcatagcagctgatgcgttactgaag
gggactattacccggctagctacagaagacagcagcccagaaaagtgccgagaggaagct
tcagccaaaggccatgttatttatgaaggcaaaagtgggcatattttatcttatgatgct
attaaaaatgttcgtgaaggaacaaggagcccaagaactgctcatgaaattagtttaaaa
agaagttatgatacaatggaaggaaatataaagcaaggaatgtcaatgcgggagtctcca
gtatctgcaccactggaaggtttaatatgccgtgcactgcctaggggtagcccacatgct
gaacttaaagaaagaacagtgttgtctggctctataatgcaaggcacaccaagagcaaca
tctgaaagttttgaggaaggcttgaaataccctaaacagattaagagagagtcacctccc
ataagggcgttcgaaggagccatcactaaagggaagccgtatgatggagtcactaccatc
aaagaaatgggccgttccatccacgagatcccaaggcaggacctgttaagccaggagagt
tgcaagactcccgaaatcgtgcagacagccaggccaatcatagaaggctccatatctcag
ggcacacccataaaatatgaaagcaattctggccagtctgccatcaaacacaatgtaaaa
tcgttaatcactggaccaagcaagctaccccgtggaatgcctcagctggaaatggtgcca
gaaaatgtgaaggtggtggagcgaggaaaatacgaagatgtgaagaccggggatgcagtt
cgttcccgtcacacgtcagtagtcagctctggtccctctgttctcaggtcaactcttcat
gaaactcctaaatcacaactgagccctgggatttatgatgataccaatgcacggagaaca
cctgtgaactatcagagtccaatgtccaggagttcacctatgatgaatagagttagtgag
gctggaatatcttctggaaagtcagcaaatcatgaaaggaaaaacacacttactcccaca
cagagagagagcgtgccagcaaaatctccagtcccaggggttgatcctgtagtggctcac
agtccttttgaccctcatcacagaggggctactcctgaagtctataggagtcacctccct
cctcacttagatcctgctatgccatttcacagggctctggatcctgctgctgctgcttac
ctgttccaaaggcagctctcacccaccccaggctacccaagtcagtaccagctttacgca
atggagaatacacgacagacaatcctaaatgactacattacctcacagcaaatgcaagtc
aatttacgtcctgatgtaaccagaggattatctcccagagagcaaactctagctctcccg
tatgcaggagcaagaggaattattgacctgaacaatatggctcccactatcttagtccct
catcctggaggaacgagcacaccacccatggagagaatcacttacatccctggtactcag
cttacattcccccctaggccttacaatcctgcctctctgtcaccaggacaccctacacac
ctggcagcttctgcagctgcaaatgctgaaagggaacgggaaagagagagggagaaggag
cgggaaagggagagggaacgagaacgggagcgggaaagagaacgggagcgagaaagggag
agaataacttcagtccctgctgagctttatcttcgaccaggaacagagcagcctggcaga
cctggcagtcatggatatgttcgttccccatccccttcagttagaagccaggagaacata
ctgcagcaaaggcctagtatttttcaaggaaccaatgggacgagcgtaatcacacctttg
gatcctgctgctcagcttcgtatcatgcagctcactcctggagctccctccataactcaa
ggtttacctgcttcccgctacaatacagctgctgatgcccttgctgcactagtagatgct
gcagcctctgctcctcagatggaagttgccaaagcaaaagataccaagcacgaaggaacc
aggatagaagagaatgtgggacgcagatcagctgtggttactgagcagcagcagatagag
cagaaaacactggaggtagaaaagagggctgtccagtgcccctatacatctgcaaatttt
tctggtggcaaatcccagggacagtcttcaacagtagtctattcagaggctggtaaagaa
aaaggacctcctcctaaatccaggtacgaggaagagctgagaactcgaggaaagaccaca
attactgctgctaacttcatagatgtgatcatcactcgacagattgcttcagacaaggat
gcacgagataggggctctcaaagttcagattcttccagtagtttatcttctcaccggtat
gaagctcctggagatgccattgaggtgatcagtcctgcaaattcacctataccaactcaa
gaaaagctacagccctatcaacaagagacacctaaaccaagccaagcagagggtgaccca
aacaggcagtatgaagggacgattcaccgttacagggcacaacaggaacctcctccttca
ccccagcaacctccacctccttcctcccaggctgaagggatggcacacgtgcccaggacg
caccgacttatcacccttgctgatcacatctgtcaaattattacacaagactttgctcga
aaccaggcagcttctcaggcctctttgcagcctcccaccactacattccagaactctacc
ccagctccaacgcctgtttcgacccgagcaaaaacatcaaatcgctacagccctgagtca
cagtcacaaccagtccaccatcagaggccaggagccagagtgtcacctgaaaatctgtct
gacaagtcccggggaagacctggaaagtctccggagaggagtcatgtttcctcagagccc
tatgagccaatctcaccccctcaggtccccgttgtacatgagaaacaggaaaatattcta
ttgctttcccaaagagctgagcctactgaacagaggactgactctcgctccccgggcagt
atgagctacctgccttcatttttcaccaaacttgagaatacttcacccatggtaaaatcc
aagaagcaagagatatttcgaaagctgaactcatctggtggaggcgacgctgacatggca
actgctcagccagggactgaaatattcaacttgccagcagtcactacctcaggtgcagtc
agttctaggggtcattcctttgcagatcctgccagtaatctgggtctagaagacattatt
agaaaagcattgatgggaaactttgatgacaagagcgaggatcatggagttgtaatgtca
caatccattgcagtagcacctggcaattccagtgctgtgggatcagcaagcaatgagaca
cgcagggaagaagccaatccatcacccaattcaggagggggagtcagcaagcagaagtta
attgggaaatcaaacagtaggaagtccaagtctccgattcctggacagggatatctggga
accgaaagaccttcttctgtctcatctgtgcattcggaaggggactaccacagacagact
ccggtgtgggcctgggaagatcggccttcatcaacaggttccacacagtttccttacaac
ccgctgacaatgcggatgctcagcagcacgccgccgacctccatcgcgtgcgccccgccg
tccatgagccaagcaaccactcaccaacagaacaggatctgggagcgagagccagcacca
ctgctttcagcacaatatgagactctgtctgacagtgatgactga
DBGET
integrated database retrieval system
