Lagopus muta (rock ptarmigan): 125703135
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Entry
125703135 CDS
T09141
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125703135 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125703135 (TRPV1)
Ion channels [BR:
lmut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125703135 (TRPV1)
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GFIT
Motif
Pfam:
Ank
Ank_2
Ion_trans
Ank_3
Ank_5
Ank_4
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
125703135
NCBI-ProteinID:
XP_048823179
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Position
20:complement(3249769..3262568)
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AA seq
846 aa
AA seq
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MFIMSSILEKMKKFGSSDIEESEVTDEHTDGEDSALEAPDNLQGTFSSKVQPSRSNIFAR
RGRFVMGDSDKDMAPMDSFYQMDHLMAPSVIKFHANMERGKLHKLLSTDSITGCSEKAFK
FYDRRRIFDAVAQGNTKDLDDLLLYLNRTLKHLTDDEFKEPETGKTCLLKAMLNLHDGKN
DTIPLLLDIAKKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHAR
ACGEFFRKIKGKPGFYFGELPLSLAACTNQLCIVKFLLENPYQAADIAAEDSMGNMVLHT
LVEIADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFA
YILRREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEIIAYSSETPNRHE
MLLVEPLNRLLQDKWDRFVKHLFYFNFFVYAIHISILTMAAYYRPVQKGENPPFTFGHST
GEYFRVTGEILSVLGGLYFFFRGIQYFVQRRPSLKTLIVDSYSEVLFFVHSLLLLSSVVL
YFCGQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLL
GFSTAVVTLIEDDNEGQDTNSSEYARCSHTKRGRTSYNSLYYTCLELFKFTIGMGDLEFT
ENYRFKSVFVILLVLYVILTYILLLNMLIALMGETVSKIAQESKSIWKLQRAITILDIEN
SYLNCLRRSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGCSGDLK
RNPSYSIKPGRVSGKNWKTLVPLLRDGSRREETQKLPEEIKLKPILEPYYEPEDCETLKE
SLPKSV
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcatgtcttccattcttgagaagatgaagaaatttggcagttctgacatagaa
gaatctgaagtgacagatgaacacacggatggggaagactctgcactggaagcacctgac
aacctgcagggtacattcagcagcaaggtgcagccatccagaagcaatatctttgcgaga
cgtggacgatttgtgatgggggatagtgacaaagacatggctccaatggattccttttac
cagatggatcacctgatggcaccttctgtcatcaaatttcatgccaatatggagaggggg
aaacttcacaagctcctgtcaacagattccatcacaggctgctctgaaaaagctttcaaa
ttttatgaccgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctggat
gatctgctgctctatcttaataggaccttgaagcatctcacagatgatgaattcaaagaa
ccagaaactgggaaaacctgcttactgaaagccatgctgaatctacatgatgggaaaaat
gataccattcccttgctgctggatattgcaaagaaaacgggaactctgaaagagtttgtg
aatgcagaatatactgacaactactacaagggccagactgcactccacattgccattgag
agaaggaacatgtacctggttaaactcttggtccagaatggagcagatgttcatgcaaga
gcatgtggggagttcttcaggaaaatcaaagggaaacctggtttttattttggagagctg
cccctgtctctggctgcctgcaccaatcagctctgcattgtgaaattcctccttgagaac
ccctaccaggctgctgatattgctgctgaggactccatgggcaatatggtcctgcatact
ctggtggagattgcagataacactaaggataataccaagtttgttaccaagatgtacaat
aacatattgatccttggtgccaaaataaatcctatcctgaagttggaagaactcaccaac
aaaaaagggctgactccattaacactggcagccaaaacagggaagatagggattttcgct
tacatcctcagacgagagatcaaagatcctgagtgcagacacttgtcaaggaagttcact
gaatgggcttatggacctgtccactcatctctttatgacctgtcctgcatagacacatgt
gagaaaaattcagtgcttgaaattattgcctacagtagtgaaacaccaaatcgtcacgag
atgctgctggtagaaccccttaacaggctgctgcaagacaagtgggaccggtttgtcaag
cacttattttacttcaacttctttgtatatgcaattcatatcagcatcctgaccatggct
gcctactacagacctgtgcagaagggggaaaatcctccctttacttttggtcacagcact
ggggaatattttcgagtgactggagagatactgagcgtattgggaggactgtattttttt
ttcagagggatacagtattttgtgcagaggcgcccatcattgaagacactgatagttgac
agttacagtgaagttcttttctttgttcactctttgctcctcctgagctctgtggtgctg
tacttctgtggccaggaactgtatgtggcttccatggtcttctccttggctctgggctgg
gctaacatgctatactacacccgtggcttccagcagatgggcatttactctgtcatgatt
gcaaagatgatcctaagagacttatgtcgcttcatgtttgtctatctagtattcctcttg
ggattttccacagctgtggtgactttaattgaagatgacaatgaggggcaggacacaaat
agctctgaatatgcccgatgcagccatacaaagcgaggccgcacatcctataacagtctg
tattatacctgcttggaacttttcaagttcactattgggatgggagacctggagtttaca
gagaactacaggttcaagtctgtgtttgtcatccttctggttctctatgtcatccttacg
tacatcctcctgctcaatatgcttattgcactgatgggagaaactgtgagcaaaattgca
caggagagcaagagcatctggaaactccagagagccatcacaatcttggatattgaaaac
agctacttgaactgtttgaggcgctcgttccgatctggaaagcaagtcttagtggggatc
acacctgatggccaagatgattacagatggtgctttagagttgatgaagtgaactggtcc
acgtggaatactaatttgggcataatcaacgaagatcctgggtgctctggggacctcaaa
cgaaatcccagttactctattaagcctggtagagtttcagggaaaaactggaaaactttg
gttccacttttaagagatggaagcaggagagaggaaacacaaaaacttccagaagaaatc
aaactaaaacctattttggaaccttattatgagccagaggattgtgagacgttgaaggaa
tcacttccaaagtcagtctga
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