Lagopus muta (rock ptarmigan): 125703260
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Entry
125703260 CDS
T09141
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125703260 (CHD5)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125703260 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
125703260
NCBI-ProteinID:
XP_048823432
LinkDB
All DBs
Position
21:624443..651475
Genome browser
AA seq
1976 aa
AA seq
DB search
MRGPAAGEELLEEADNDEDVSGRAKLSCARGGRPRELSFSSSEDDDGVLEGLEEFFAEER
VAAQKKKKCKKLKDCKAAKIKRRKKEGSNDEISDNDEEIEEKSESEGSDYSPNKKKKKKL
KEKKEKKNKRKKKDEEEDDDDGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAF
SQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTVAP
ALAASPQQPALPPVIRKAKTKEGKGPGVKKKIKSSKDGKKKGKGKKMAGLKFRFGGIPSK
RKKGSSSEEEEREESDFDSASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQD
YCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEDEEE
EGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPL
KGKVQRILHWAWKEPPAPPPSALPAPDAELALPLPKVLEGIPEREFFVKWAGLSYWHCSW
VKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPHYAKMEERFYRY
GIKPEWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHR
ELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQL
EGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWE
REFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTS
YELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEE
LFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTE
LIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVE
APVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGY
KYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPH
NDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMT
KQELDDILKFGTEELFKDDVEGMVSQGQRLTMPDAVTPFSDTLSTKGGAVTPGMKKKHGG
TPPGDSKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDG
VEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQE
WQDELSDNQSEYSIGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVGGNIEVL
GFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADG
AETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDMILEGPESKKCNEM
VSSDPNTPVPASPAHVHAGPLALAEKTDPPLGFQEEKDQVEQKSRRASDSQVPGSTEKVE
SEEYQENCESKEKLKEEKQDESEKTEPSPEPLGKDEGVQEKEKALEKPESNSSPGKGEDK
EVKPEDTKVEEKEQSEAQQNGDKEEEDGKKDDRNVNFRFMFNIADGGFTELHTLWQNEER
AAISSSKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEM
KNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSK
ESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLT
TRGGEPTVQQLPFFPQGSFGSSQIYNNSFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccggcggccggcgaggagctgctggaggaggcggacaacgacgaggacgtg
tcggggagggcgaagctgagctgtgcgcggggaggccgcccacgtgagttgtccttctcg
tcctcagaagatgatgatggggtcctggaagggctggaggagtttttcgcagaggagcga
gttgctgcgcagaaaaaaaagaaatgcaagaagctgaaagactgcaaggcggccaaaatc
aagaggaggaagaaagaggggagcaatgatgagatatcagacaatgatgaggagattgag
gagaaatctgagagtgaaggaagtgactattcccccaacaagaagaaaaagaaaaaactg
aaggaaaagaaggagaaaaaaaacaagcggaaaaagaaggatgaagaggaggatgacgat
gatggagggctaaaggagcctaagagctcagcccagctgatggaagaatggggccttgat
gatgtagattacattttctcagaagaagattaccacactcttactaattacaaggctttc
agccaatttctcaggcctctgattgccaagaagaaccccaagatccccatgtccaagatg
atgactgtgcttggtgccaagtggcgagagttcagtgccaacaacccgttcaagggcagc
tcggcggcggcagcagcagcagctgtggctgcagcagtggagactgtcacagttgcccca
gcactggctgccagtccccagcagcctgcattgccccctgtcatcaggaaagcaaaaacc
aaggaaggcaagggcccaggtgtgaagaagaaaatcaagagctcgaaagatgggaagaaa
aaggggaagggaaaaaagatggcaggcctaaaattccggtttggaggaatccccagcaaa
aggaaaaagggctcctctagtgaagaggaagagcgggaggaatccgactttgacagcgcc
agcatcaacagctcctctgtgcgctccgagtgctcggctggcctggggaagagagggaag
aggaggagaaagaaaaagaggattgaagaaggggatggctacgagacggaccaccaggac
tactgcgaggtgtgccagcagggaggggagatcatcctgtgtgacacctgtccgcgtgcc
taccacctcgtctgcctggaccctgagctggagaaagcccccgagggcaagtggagctgc
ccacactgcgagaaagagggcatccagtgggagccaaaggaggaggaggatgaggaggag
gaaggtggtgaagaagaggaggatgaccacatggagttctgccgtgtctgtaaggatgga
ggggagctgctgtgctgcgacacgtgcccgtcctcttaccacctgcactgcctgaaccca
cccctgccagaaatcccaaatggtgaatggctctgccctcgctgtacatgccctcctttg
aagggaaaagtacagcgcatcctgcactgggcctggaaggagcctccggccccgccaccc
tctgcgctgcctgccccagatgcggagctggctctgcccctgccgaaggtgctggagggc
atcccagagcgtgagttcttcgtcaagtgggcagggctctcctactggcactgctcctgg
gtcaaggagctacagctggagctctaccacaccgtgatgtaccgcaactaccaaaggaag
aacgacatggatgagccgccggcctttgattatggctctggagacgaggacagccagagg
gagaaaaggaagaacaaggaccctcactacgcaaagatggaggagcggttctaccgctat
ggcatcaagcccgagtggatgatgatccaccgcatcctgaaccacagctttgataaaaag
ggggacatccattatctgatcaaatggaaggatctgccatatgaccagtgcacctgggag
attgatgagatagacatcccatactatgaaaacctcaagctcctctactggaatcacagg
gagctgatgctgggggaggacacacgtcctctgaagaagctgaacaagaaggggaaaaag
ctgaaagaggagaagctagaaaagcctccagaaactcctcttgttgatcctacggttaag
tttgacaagcagccttggtacattgatgccacaggaggcacgctgcatccttaccagctg
gaagggctcaactggttgagattttcctgggcccaaggcactgatacgatcctggctgat
gagatgggactggggaagactgtgcagaccattgtgttcctgtattccctgtacaaggag
ggccactccaaagggccgtacctggtcagcgccccactctccaccatcatcaactgggag
cgagagtttgagatgtgggcgcccgacttctacgttgtgacctacactggggacaaggag
agccgctcggtcatccgggagaatgagttctcttttgaagacaatgccatccgcagcggc
aagaaggtgttccggatgaagaaggaagcccagatcaagttccacgtcctgctcacctct
tatgagctgatcaccatagaccaggcggtgctgggctccatcgagtgggcttgtctggtg
gtggatgaagcacacagactgaagaacaaccagtccaaattctttagggtattaaacagt
tacaagatcgattacaagttactgcttactgggactccactccagaacaacctggaagag
ctcttccacctgctcaatttcctgactcccgagaggtttaataacctggagggcttcctg
gaggagtttgcagacatctccaaggaggaccagatcaaaaagctccatgacctgctgggc
ccccacatgctgcgccggctcaaggcagacgtgttcaagaacatgccggccaagacggag
ctgattgtcagagtggagctgagccagatgcagaagaagtactacaagttcatactaaca
cggaattttgaagccctgaactcgaaaggtggagggaatcaggtctcactgctcaacatc
atgatggacctgaagaagtgctgtaaccacccatacctcttccctgtggccgctgtggag
gccccggttctgcccaatggatcctatgatgggaattctttggtcaagtcttctggaaaa
ctgatgctgctccaaaagatgctgaagaagttacgggacgggggtcacagagttctgatc
ttctcccagatgacgaagatgttggacctgctggaggacttcctggagtacgagggctac
aagtacgagcgcatcgatgggggcatcactggaggcctgcgccaggaagccattgacagg
tttaatgctcctggtgctcagcagttctgctttctcctctctacccgtgctggtggtctg
ggcataaaccttgctacggctgacacagtcattatttatgattctgactggaatccccac
aatgacatccaggcgttcagcagagcgcaccgcatcgggcagaacaagaaggtgatgatc
taccgctttgtgaccagagcctctgtggaggagcgcatcacccaggtggccaaaaggaag
atgatgctcacccacctggtggtccgtcctgggcttggctccaagtcaggctccatgacc
aagcaggagctggatgacatcctgaagtttgggacggaagagctcttcaaggatgatgtg
gaaggcatggtgtctcagggacagcggctcaccatgccggatgccgtcacccctttctct
gacacgctgtccaccaaagggggtgcagtgactcctggcatgaaaaaaaagcacggtggc
accccaccaggtgacagtaaggacgtggatgacagcagtgtgatccactatgatgatgct
gctatctctaagcttctggaccgaaaccaggacgcgactgatgacacggagctgcagaac
atgaacgagtatctcagctcctttaaagtggcccagtatgttgtgagagaagaggatggt
gtggaagaggtggaacgtgagatcatcaaacaagaggagaatgtggaccctgactactgg
gagaagctgctgcggcaccactatgagcagcagcaggaagatctggccaggaatttgggg
aaggggaagagaatccgcaagcaggtcaattacaatgatacctcacaggaggaccaagag
tggcaggacgagctctctgacaaccagtctgagtactccattggctctgaggatgaagat
gaagactttgaagaaagaccagaaggtggcagaagacaatcacggagacagctgaagagt
gaccgggacaaacctctccctcctttgctggcaagagttggggggaatattgaggttctc
gggttcaatgcccgccagcgcaaggccttcctgaacgccatcatgcggtggggcatgccg
ccccaggacgccttcaactcccactggctggtgagggatctgcgagggaagagcgagaag
gagttcagggcttacgtctccctgttcatgcggcatttgtgtgaacctggagcagacggt
gctgagacctttgctgacggggttccccgggaggggctgtcgcggcagcacgtgctgacc
cggatcggagtgatgtcactagtaaggaagaaggtgcaggagtttgagcatgtcaatggg
aagtacagcaccccagatatgattctggagggcccggagagcaagaagtgcaatgagatg
gtttcttcagatcccaacacccctgtccccgccagccctgcgcacgtacatgcaggacct
cttgcccttgcagaaaaaacagatccaccgcttggattccaggaggaaaaggaccaagtg
gagcagaagtccaggagagcatctgacagccaggtgcccggaagcactgagaaggtggaa
agtgaagagtaccaagaaaactgtgaaagcaaggagaaactgaaggaagagaaacaggac
gagagtgaaaaaactgagccttctcctgagcccctggggaaagatgagggagtccaagaa
aaagagaaggctttggaaaagccagagtcaaacagcagtcctggtaaaggggaggacaaa
gaagtcaagccagaggataccaaggtggaagagaaggagcaaagtgaggctcagcaaaat
ggtgacaaagaagaggaggatggaaagaaggatgacagaaacgtgaactttagattcatg
ttcaacattgctgacggaggctttacggagctgcacacgctgtggcagaatgaggaaaga
gctgccatctcctccagcaagatctacgacatctggcaccgcaggcacgactactggctg
ctggcaggcatcgtcacccacggctacgcccgctggcaggacatccagaacgacccgcgc
tacgtgatcctgaacgagcccttcaagtcagagatacacaaagggaactacctggagatg
aagaacaagttcctcgcccggcgcttcaagctgctggagcaggccctggtgatagaggag
cagctgcggcgggcggcgtacctcaacatgactcaagaccccaatcacccggccatggca
ttgaacgcccgtctggctgaagtggagtgccttgccgagagccaccagcatctctccaaa
gagtccctcgcggggaacaagcctgccaatgccgtcctgcacaaggtgctgaaccagctc
gaggagctgctgagtgacatgaaggctgatgtgacgcgcttgccctccatgctgtcccgc
atccctcctgtggctgcacggctgcagatgtcggagcgcagcatcctcagccgcctgacc
acgcgtggcggggagcccacggtgcagcagcttcccttctttcctcagggctcctttggt
tcctcccagatctacaacaacagctttggaccgaatttccgaggtcctgggccgggtggg
attgtcaactacagccagatgcctctgggaccctatgtgacagatatttag
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integrated database retrieval system
