Lagopus muta (rock ptarmigan): 125703364
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Entry
125703364 CDS
T09141
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125703364 (YBX1)
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125703364 (YBX1)
03041 Spliceosome [BR:
lmut03041
]
125703364 (YBX1)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
125703364 (YBX1)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
125703364 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
125703364 (YBX1)
Spliceosome [BR:
lmut03041
]
Common components
Common spliceosomal components
General mRNP proteins
125703364 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
DUF8529
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
125703364
NCBI-ProteinID:
XP_048823692
LinkDB
All DBs
Position
21:complement(6388636..6396291)
Genome browser
AA seq
326 aa
AA seq
DB search
MSSEAETQPPAAPVPAAAPAAAPADSKPNGGSGNGSGGLASAAPPAGGDKKVIATKVLGT
VKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEA
ANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGAENIPEGQA
QQRRPYRRRRYPPYYMRRPYGRRPQYSNPPVQGEIVEGADNQGAGEQGRPVRQNMYRGYR
PRFRSLTFRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQ
DGKETKTAEPPAENTSAPEAEQGGAE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagccgcccgccgcccccgtccccgcggcggcccccgcc
gccgcccccgccgactccaaacccaacggcgggagcgggaacgggagcggcggcctggcc
tcggcggcgcctcccgccggcggggacaagaaggtcatcgcaacgaaggttttgggaaca
gtgaaatggttcaacgtacggaacggttacggcttcatcaacaggaatgacaccaaggaa
gatgtgtttgtccatcagactgccataaagaagaataaccccaggaagtacctccgcagc
gtaggagacggagagaccgtggagtttgatgtggttgaaggagagaagggtgcggaggca
gcgaacgtgacagggcctggtggcgttccagtgcaaggcagcaaatacgcagcagaccgt
aaccattacagacgatatccgcgtcgcaggggtcctccacgcaactaccagcaaaactac
cagaacagtgagagtggggagaagaacgaaggagcagagaacatcccggaaggccaagcc
cagcagcgccgtccctaccgcaggcggcggtacccaccttactacatgcgtaggccctac
gggcgtcgaccacaatattccaaccctcccgtgcagggagagatagtggagggtgctgac
aaccaaggtgcaggagagcaaggcagaccagtcaggcagaacatgtatcgaggttacaga
ccacgattccgcagcttgactttcaggggtcctcctcgtcaaagacagcctagagaggat
ggaaacgaagaagataaagagaaccaaggggatgagacccaaggtcagcagccacctcaa
cgtcggtaccgtcgtaacttcaactacagacgcagacgcccagagaaccctaaaccacaa
gatggcaaagagacgaagacagccgaaccaccagctgagaacacgtccgctcccgaggcc
gagcagggcggggctgagtaa
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integrated database retrieval system
