Lagopus muta (rock ptarmigan): 125703379
Help
Entry
125703379 CDS
T09141
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03013
Nucleocytoplasmic transport
lmut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125703379
03015 mRNA surveillance pathway
125703379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125703379
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125703379
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125703379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125703379
NCBI-ProteinID:
XP_048823719
LinkDB
All DBs
Position
21:complement(4808208..4815336)
Genome browser
AA seq
480 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSTLQLKEEKAKPDANGAVLKADDNVERTEDEEKEDRAAQS
LLNKLIRSNLVDTSNQVEVLQRDPNSPLYSVKSFEELHLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPSPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTG
KVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVF
VLDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKR
EEETLDTIKQYYVLCNSRDEKFRALCNIYGAITIAQAMVFCHTRKTAGWLAAELSKEGHQ
VALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPD
NETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFSKKINRLDTDDLDEIEKITN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggccgtggacgagcaggaagcggcggctgagtcgctg
agcaccctgcagctgaaggaggagaaggccaagcccgacgccaatggtgccgtgctgaag
gcggacgacaacgtggagaggacggaggatgaggagaaagaggaccgagctgcccagtcc
ctgctgaacaaactgatccgcagcaacctggtggacaccagcaaccaggtggaggtgctg
cagagggaccccaactcaccgctctactccgtcaagtccttcgaggagctgcacctgaaa
ccacagctcctgcaaggagtctatgccatgggcttcaacagaccatcaaagatacaggag
aacgccctgcccatgatgcttgctgaacccagcccgcagaacctgattgcacagtctcag
tctggtactggcaagacagctgccttcgtcctcgccatgctcagccgtgttgaacctggg
aacaagtacccacagtgcctgtgcctttccccaacatacgagctggcacttcagacagga
aaagtgatcgaacagatggggaagttttacccggagctgaagcttgcatacgctgtccga
ggcaataaattggagagaggtcagaagatctcagaacagattgtaattggcacacctggc
actgtgctggactggtgctccaagctgaagttcatagatcccaagaaaatcaaagtgttc
gtcttggacgaggctgacgtgatgatagcaacccagggccaccaggatcagagcatccgc
attcagagaatgctccccagggactgccagatgcttctgttctcagccactttcgaggat
tccgtgtggaaatttgctcaaaaagttgttcctgacccaaatattatcaagctgaagaga
gaggaggagacgctggacactattaagcagtattacgttctgtgcaatagcagagatgag
aagttccgtgctctctgtaatatctatggtgctatcaccattgcccaggccatggtcttc
tgccacacccggaagacggctggctggctggcagcggagctctcgaaggaaggccaccag
gtggcactgctcagcggggaaatgatggtggaacagagagccgcggtgatagagcgcttc
cgagagggcaaggaaaaggtgctggtgaccaccaacgtgtgtgccagagggatcgatgtg
gagcaggtctctgttgttatcaattttgaccttcctgtggacaaggatggaaatccagac
aatgagacctacctgcaccgcatcgggcgcacgggtcgcttcggcaagcgagggctggcg
atcaacatggtggacagcaagcacagcatgaatatcctcaacaggatccaggaacacttc
agcaaaaagatcaacagattggatactgatgacttggatgaaattgagaagataactaac
tga
DBGET
integrated database retrieval system
