Lagopus muta (rock ptarmigan): 125703503
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Entry
125703503 CDS
T09141
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00310
Lysine degradation
lmut01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125703503 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125703503 (PRDM2)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125703503 (PRDM2)
Enzymes [BR:
lmut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
125703503 (PRDM2)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125703503 (PRDM2)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125703503 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_ZNF462_1st
zf-H2C2_2
zf-C2HE
zf-C2H2_11
zf-MYST
PyrI_C
Motif
Other DBs
NCBI-GeneID:
125703503
NCBI-ProteinID:
XP_048824027
LinkDB
All DBs
Position
21:complement(5073925..5136453)
Genome browser
AA seq
1697 aa
AA seq
DB search
MNQNTTEPPAAVETLADVPEHVLRGLPEDVRLFPSAVDKTRLGVWATKSILKGKKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPKKGNWLRYINWARSGKEQNLFPLEINR
TIYYKSLKPIAPGEELLVWYNGEDDPEIAAAIEEERASARSRRHSPKAKKGKKKTQESKN
KGRKATDTKQKKTDLDSSADMRDSKEGHKEEDEKPSVSAVLSLEQTAVIQEMVNQDVLPK
LMIPSPASELQIVTEEKQEEAINCASDDLDEDEEEEDEEEEEEEMEDTNMPKENAEMPLI
CEEKLDSMEEQKSTSEESPESSPKKLVVKIPKARGESNGDVQETFMFPCQHCERKFTTKQ
GLERHMHIHISTVNHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQHLDNV
ADNQVIVSDGLKDDLNVSNLVQDSVVLDSEKVSQEMSHSAFAEENKEPKELHPCKYCKKV
FGTHTNMRRHQRRVHERHLIPKGVRRKGYFHEEPPLQTEQAPPVQSVYIASTEIEEEGEI
DDVYIMDISSNISENLNYYIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVEIS
SNIKITQTQVNEPPKEPSGSGSNESKKRRTASPPLVPKIKTEIEPEPITPTSSLNLPLSI
STESLPFHKDKSVYLSSKLKQLLQTQDSKITPSNEIPKLGPSVASSSILPPVSSRFKRRT
SSPPSSPQHSPVLRDFVKSGEGKTVWNDNLRSSKMPKLESHSNSPAWSLTGREEREAVSP
LCFEDFKTSKDWTVAPTFGNVCNQQPLDLSSGVKQRSDIKNKHQVPWESVLDLSVHKKPC
SDAEIREYKENSIQPTCSGVKKKKPTTCMLQKVLLNEYNGMDAATDSTPSVNRSPSPSKS
LESQPEPDTDPSLSASSSVDTQPLSSSVSLVPHASVAPSMCQLPPLLTPTNPPSPPPCPP
VLTVATSPPPLLPTMPLSTPDVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSPVP
SVEPLISAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLENTL
PMIKQEETESEQKAREDPHAASESGVVQETFNKSFVCNVCESPFLSIKDLTKHLSVHAEE
WPFKCEFCVQLFRDKTGLSEHRFLLHGVGNIFACSVCKKEFAFLCNLQQHQRDLHPDKVC
THHEFESGTLRPQNFTDPSKANIEHMQSLSEDSLELSKEEEEDEDLNDSSEELYTTIKIM
ASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCT
KCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVITGPGKNAFRR
MGQPKRLNFNVEISKMSSNKLKINALKKKNQLVQKAILQKKKSAQQKAELKNSLSESDPH
ICPYCNREFTYIGSLNKHASYSCPKKPISPSSKKKSSKKGASSSPANSEKGSNQRRRTAD
AEIKMQSMQPHLGKTRARTSGPAQIQLPSASFKSKQSIKFVPPIRSKKPNPSSSLRNSSP
VRVSKMTHVDGKKTKVVGKNTSSGISSKATRKLHVRIQRSNKAVLPSRSAVASKKKADRF
TVKSRERIGGPITRSLQQAANAEAAESKKDESSTKQELKDFSYRLRMASRCPSSSSPNTS
TRQCKKSSCTASPFFKE
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaaccgagcctcctgctgcagtggagaccttagctgatgtacctgag
cacgtgcttcgggggcttcctgaggatgtcaggctcttcccatctgctgttgacaagaca
aggcttggtgtttgggcaacaaagtcaattttaaaagggaagaaattcgggccctttgtt
ggtgacaagaagaaaagatctcaagttaagagcaatgtatacatgtgggaggtgtattac
ccaaacctggggtggatgtgtgttgatgcaacggatccaaagaaagggaactggctgcgg
tatataaactgggcacgttcaggaaaggagcaaaacctctttcctctggagatcaacagg
accatatactacaaaagtttaaagccaatcgcgcccggcgaggagctgttggtgtggtac
aatggggaggacgacccggagatagccgccgctattgaggaagagcgagccagcgcccgg
agccggcggcactccccgaaagccaagaaaggaaagaaaaagactcaggaaagtaaaaac
aaggggaggaaggcaacagatacaaagcagaaaaagactgatttggattcttcggcagat
atgagggattctaaagagggtcataaagaagaagatgaaaagccttccgtttctgctgta
ctgtccctggaacaaacagctgtgattcaggagatggtaaatcaagatgtgcttccaaag
ctgatgattcccagtcctgccagtgaactgcaaatagtgaccgaagagaaacaagaagaa
gcaataaactgtgcgtcagatgatttagatgaggatgaagaagaagaggatgaagaagag
gaagaagaggagatggaagataccaatatgcctaaagaaaatgctgaaatgcctttgata
tgtgaagaaaagttagactctatggaagagcaaaagagtacatcagaggaatctccagaa
agctctccaaagaaacttgtggtgaaaattccaaaagcaagaggtgagtcaaacggtgat
gttcaggaaacattcatgtttccttgtcagcattgtgagaggaagtttacaacaaagcaa
ggacttgaacgccacatgcacattcatatatctactgttaaccacgctttcaaatgtcga
tactgtgggaaagcctttggtactcaaattaacagacgaaggcatgagcggcgccatgag
gcagggccaaaaaggaaaccgttcttaacactaacatcatcacagcacctggataatgtt
gctgataaccaagtaattgtgagtgatggtcttaaagatgacttgaacgtttccaatctt
gtacaagactccgttgtcttggattctgagaaagtctcccaggaaatgtcccactctgct
ttcgctgaggaaaacaaggagcccaaagaattgcatccatgcaaatactgcaaaaaggtt
tttggaactcacaccaacatgcggagacatcagcgcagggttcacgagcggcatcttatt
cccaaaggtgtcagaagaaaaggatacttccatgaagagccaccgcttcaaactgagcag
gccccaccagtgcagagtgtatatatagcaagtactgaaatagaagaggaaggtgaaata
gatgatgtctacattatggatatttccagcaatatttctgaaaacttaaattattacatt
gatggtaaaattcagtccaacagcagcactagcaattgcgatgtgattcagatggagtcc
aactctgcagacttgtatggactaaattgtatcatcagtccagtcacggtggaaatttcc
tcaaatataaagattacacaaacacaggtgaatgaacctcctaaggagccttctggcagc
gggagcaatgaatccaaaaagaggagaactgccagccctcctcttgtaccaaaaataaaa
actgagatagaaccagaacctataactcctactagttctttaaatcttcctcttagcatt
tcaacagagagcttacctttccataaagacaaaagtgtgtatttgtcatcaaaattaaaa
cagcttcttcagacacaggacagtaagatcactccatcaaatgaaatccctaaactggga
ccttctgttgcatcatcatctattttgcctccagtatccagtagatttaaaagaaggacc
agctctcctcccagttctccacagcacagtccagtacttcgagattttgtcaaatcaggt
gagggaaaaactgtgtggaatgataatcttcgaagttcaaaaatgccaaagttagaaagc
cacagcaactcacctgcttggagcctaactggaagggaggagagggaggctgtgagccct
ctttgcttcgaagacttcaaaacatcaaaagactggacagtggctccaacttttggcaat
gtatgcaaccagcagcccctggatttgtctagtggtgtaaaacaaaggtctgatatcaaa
aataagcatcaggttccttgggaatctgtattagatttaagtgtgcacaagaagccttgc
agtgatgccgaaattcgggaatacaaagaaaattccattcaaccaacctgcagtggtgtt
aaaaagaagaaaccaaccacttgcatgctacagaaggttctgctgaatgagtataatgga
atggatgcagccacagacagcacacccagtgtgaacagaagcccgagcccaagcaaatcc
ctggaatctcagccagaaccagacacagaccccagtctgtctgcgtcgtcttctgttgac
actcagccccttagttcctctgtttcccttgtgccacacgcatctgtcgcaccttccatg
tgtcagctgcctcctttgttaacaccaactaatcctccttccccaccaccctgcccgcct
gtgctcacagttgctacatcacctcctccccttcttccaacaatgcctttatcaactcca
gatgtctctgctagtgccactaacacttcctcttgcccatcgccactttcaaacactact
acccagtctccactaccagttctttcacctacggtttctccttctccatctccggttcct
tcagttgaaccgctcatttctgctgcttcacctggtcctcctactctctcttcttcctct
tcttcctcttcctcctcctcctccttctcttcctcctcctcctcatcatctccatctcct
cctcccctttcagtggtttcttccgttgtttcttcagctgataaccttgaaaatactctt
ccaatgataaaacaggaggaaactgaaagtgagcagaaggccagagaagatcctcatgct
gcaagtgaatcgggagtagtgcaggaaacattcaataaaagctttgtgtgcaatgtctgt
gaatcaccttttctttctattaaggacctaactaagcatttatccgtccatgctgaagaa
tggcccttcaaatgtgaattctgtgtacagctttttagggataaaacaggcttgtcagaa
catcgctttctgcttcacggagtaggaaatatctttgcttgctcggtctgtaaaaaggaa
tttgcttttttgtgcaatttgcaacagcatcagcgagatctccatccagacaaagtgtgc
acacaccatgagttcgaaagcgggactttgagaccccagaattttactgaccccagtaag
gccaacatagagcacatgcagagcctgtcagaagactctttagaactttctaaagaggag
gaagaagacgaagatctaaacgattcctccgaagagctttatactactataaaaataatg
gcttctggggtaaaatctaaagatccggatgttcggatgggcctcaatcaacactaccca
agctttaaaccacctccatttcagtatcaccatcgaaatcctatgggtattggcgttact
gcaacaaacttcactacccacaatatcccacagactttcactactgccatccgatgcaca
aaatgcgggaaaagtgtggataacatgcctgagttacacaaacacatcctggcctgtgca
tctgccagcgacaaaaagcgatatacgcccaaaaaaaatccagtgccactgaaacagact
gtgcagcctaagaatggcatggttgtcatcactggtcctggaaagaatgccttcagacga
atgggtcagccaaaaagacttaatttcaacgttgagattagcaaaatgtcttcaaataaa
ctaaaaataaacgcgttgaaaaagaaaaaccagcttgtccagaaagctatcctgcaaaag
aagaaatctgctcagcagaaggcagaattgaaaaatagtctttctgagtcagaccctcac
atctgcccctactgcaacagagagtttacttacattggaagtttgaacaaacatgcgtcg
tacagctgtcccaaaaaacccatctccccatcctccaaaaaaaaatcatccaaaaaaggt
gcaagttcatcacctgcaaacagcgaaaaaggcagcaaccagcgcaggagaacagcagat
gcagaaatcaaaatgcaaagcatgcagcctcacttgggcaagacaagagcgcgaacctca
ggacctgcacagatccagctgccctctgcatccttcaaatcaaagcaaagcattaaattt
gtacctcccattcgatcgaaaaagccaaatccgtcttcgtcactgaggaactctagtcct
gtgagagtgtccaaaatgactcacgtggatgggaaaaaaactaaggtggtaggtaagaac
acttcctctggcatctcaagcaaagccacccggaaattgcacgtcagaatacaaaggagt
aataaggctgttttgccaagtaggtctgctgtggcaagtaagaaaaaagcagacagattc
actgtaaaatctagagagaggattggaggacctattacacgaagcttacagcaggcggca
aatgccgaggcagcagaaagcaaaaaagatgaaagcagtacaaagcaagaattaaaagat
ttcagttacagactccgcatggcctctagatgtccctcctcctcttctcctaacaccagc
accaggcaatgcaagaaatccagctgcactgcatcccccttcttcaaggaatag
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integrated database retrieval system