Lagopus muta (rock ptarmigan): 125703558
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Entry
125703558 CDS
T09141
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04270
Vascular smooth muscle contraction
lmut04625
C-type lectin receptor signaling pathway
lmut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125703558 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125703558 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
125703558 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125703558 (ARHGEF12)
Membrane trafficking [BR:
lmut04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125703558 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Ribonuc_2-5A
Pept_S41_N_bact
Mga
PDZ_Tricorn
DUF3967
AAA_23
Motif
Other DBs
NCBI-GeneID:
125703558
NCBI-ProteinID:
XP_048824118
LinkDB
All DBs
Position
22:complement(3707477..3774331)
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AA seq
1545 aa
AA seq
DB search
MSGTQPATTDRFPLKKPTRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDLAAFGHMSPIMTSPHSP
GTSGNAERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQSLQEEYSRSSSSRLLREI
QETKKHITQLQEQLSKATGCAQDGVLSSRSVAESLQVSEVEAESGDALSKLDYSSDSPSR
PNSDIADSPRSGLKERVYLDESPEKTEVQDTDSQSSIGSPSSRVGPQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYSDLYKQTNAKETRRVF
LEFYQFFLDRAANLKVPIPDEISVDLEKRRPELIPEELHRHYIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELTKLDAERVRDRNAVEKERACAEQIIAKIEEVLMTSQPLEEDKSS
TIQYVILTYMKHLGVKAKEARNLEQKRGRIGFLPKIKVQSIKKEKEGDEKGKRRGFPNLL
GPPRRPSRHDSSAIGRAMEIQKQRHQKHIPAVPSVSPEPPDSGKVRQSGSSSDGTDAPYP
PANPMSPLAVGPFSSPEGNKDSESGSKQTGEAPPANECVDGTPRTPNTTFEFPSPLENLP
EEEGESERVVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDTDPPNWQQLVSREVLMGLK
PYEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSSDKKKIFSNLEDILGLH
VALNDQMKAVRKRNETSVIDQIGEDLLSWFSGAAEEKLKHATATFCSNQPFALEVIKSRQ
KKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKK
AADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLH
EGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKL
NTVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNIWQDLIAQMAGNVKMESSRRV
IPLPQSGPGEEEREEEEQQKLKDQHGIPASSLQSPDKDLGLDSTLILNAQTSPTMSEKSE
VESLLVAERQFDKVQQADLALKEASPCYEHTATNLPLVSGGQWALDALRNLDLLKKLLVQ
QLGFAEKGTLEDRQRFPRFRTVSQEAQTEGGSELGLQHSDHNKFHQPGADPTLPRSGTNE
PTAHYGLRTSAESPAPGDAMQLGARDPRPSSNLAMDRMGVNLEVSATELEGLGADESGEH
FFDAREAHSDENPSESELMERKDEEDVQIRISGNVLILDGYEAVQESSTDEEVSSLVLQG
AAGGHSSLDSAQQQPLSPRDTQSDGGSSPFAEEMMVSRWGGVEEPCTVVANPPFWSIESR
VQMMQYIQKIENNLEKLKEVEEDYIILRRQGLAGSASTGEHSEKS
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagcccgcgaccacggacaggtttcctcttaaaaaacctacaaggcac
ggcagcattctgagcagagagtctccagcagacaagaagcagaaggttgagcgctgcagc
agcacccacgacttcgatcccacagatagctcctccaagaagacaaagtctagttcggag
gagagtagatccgagacgtatggtcttgttcagcggtgtgttgttatccaacgggatgaa
aatggatttgggctgacagtcagtggagacaacccagtctttgtgcagtctgtcaaagaa
gatggagcagccatgcgagctggagtgcaaacgggtgacagaattatcaaggtgaatggc
actcttgtaacacactcaaaccatttggaggtggtaaagctgatcaagtcgggttcctat
gtagctctcactgttcaggggcgcccaccggggtcgccccagattcccttggctgattct
gaagtggatctggcagcatttgggcatatgtctcccatcatgacatcaccccattcgcct
ggcacatcaggaaatgcagaaaggattactagcccggtgcttatgggggaggagaataat
attgtccacaaccagaaggtggagattctgagaaagatgctacagaaagagcaggagcgg
ctgcagtctctgcaagaagagtacagccgatcttccagctcacgactgctcagagagata
caggaaacaaagaagcacattactcagctgcaggagcagctgtccaaagccacaggctgt
gctcaggatggagttttgtcctccaggtctgtggcagaatcgctgcaggtcagtgaagtg
gaggcagagagtggagatgctctgagcaaactggattacagtagtgacagcccctctcga
ccgaacagtgacattgctgatagtcctcgcagtggcctgaaggagcgggtttatctggat
gagagcccagagaagactgaggttcaagatactgattctcagtccagcattggaagtcct
tcatcccgtgtgggaccacagatcattggagcagaggatgatgactttgacactgagcag
gagcagataaatggacaatgcagttgtttccaaaacattgagctcctgaagtctcgccca
gctcacctggctgttcttctgcaccatgtggtgtcccagtttgaccctgcagcattgttg
tgctatctttactcagacttgtacaagcagaccaatgcgaaggagactcggcgtgtcttc
ctggagttttaccagttcttcttggacagagctgcaaaccttaaagttccaataccagat
gaaatctctgtagatctagagaaaagaaggccagaactcattcctgaagagcttcatcgc
cactatatacaaactatgcaagataaagtctgtccagaagttcagaggaatctggaagat
ttcaggcagaaacgtagtatggggttgaccctggcagagggagagttgaccaagttggat
gcagaaagggttcgtgaccggaacgcggtggagaaggaaagagcatgtgcagaacagatt
attgccaagattgaggaagtcctgatgacatctcagcctttggaggaagacaagagctcc
accatacaatatgtgattcttacttacatgaagcacctgggagtcaaagctaaagaggct
cggaacctggagcagaagcgtggccgtattggtttcttgccaaagatcaaggtacaaagc
atcaagaaggagaaagaaggagatgaaaaaggaaagaggagaggctttcctaatctcttg
ggtccaccgagaagaccgagccgacatgacagcagtgcaattggcagagccatggagata
cagaagcagcgccaccaaaagcacatccctgcagtgccttctgttagcccagagcctcca
gattcgggcaaggtgcgccagagtgggtcctccagcgatggcacagatgcaccataccca
cctgccaaccccatgtctccgttggcagtgggtcctttctcatctccagagggaaacaag
gacagtgaatcaggctcgaagcagacaggagaagccccacctgctaatgagtgtgtggat
ggcacaccccgcacacccaacactacttttgaattcccatctcccttggaaaacttgcca
gaggaggagggagagtcagagagagtggtcgacatggggacaccaaagccttttcgcaag
atggacagcgttggttttgcagatgtgcaaagtgaggatgagctgtatgactttgacatg
gacacagaccctcccaactggcagcagcttgtgagccgagaagtgttgatggggctgaaa
ccctatgagatcaagaggcaagaagtgattaatgagctgttttacactgagagagctcat
gtccgcaccctgaaggttctgcataacgttttctaccagcgtgtcacccgggaagggatc
ctcaactccagtgacaaaaagaagatcttttcaaacctggaggatatcctggggcttcat
gtggcattgaatgatcagatgaaagcggtccggaaaaggaatgagacttctgttattgac
caaattggggaggatttgctttcttggttcagtggagcagcagaggagaagctgaaacat
gccactgccacgttctgcagtaaccagccctttgctctagaggtcataaagtcccgccag
aagaaagactctcgtttccagactttcgtgcaggatgctgagagtaatcccctgtgtcgc
cgcctgcagctgaaggatatcattccaacagagatgcagagactgacaaagtaccccctt
ctgctggataacattgcaaagtacacagaactgcctgaagagaaggagaaagtgaagaaa
gcagcagatcactgccgtcagatccttaaccacgtgaaccaggctgtcaaggaatcggag
aacaagcagcatctggaagattatcagcgtcgtctcgacctgtcctacttaaagcagtct
gaggatcccatgatggatgagttcaggaacttggatctcacaaagagaaaaatgcttcac
gaaggacctttgacttggaaggttaatcgtgacaaaactatcgatctctacactctgctc
ttggaggacattctggtgctgttgcagaaacaagatgataagctggtcttgaagtgtcac
agtaaaatcttggcgtcgacagctgatagcaaacacaccttcagtcctatcatcaaactg
aacactgttctggttcgtcaggtggcaacagacaacaaagcgttcttcgtcatctccatg
tcagaaaatggtgctcacatttacgagctggtggcacagacagtttcagagaagaacata
tggcaggaccttatagctcagatggcagggaatgtaaaaatggagagtagcagaagagtg
attccattaccgcagtcgggacctggcgaagaagagcgtgaagaagaagagcagcagaag
ctcaaagaccagcatggcattcctgccagtagcctacaaagcccagacaaagatctgggc
ctggactctacattgatactgaatgctcagacttcacccaccatgtctgaaaagtccgag
gtggaaagtcttcttgtggcagaaagacagtttgataaagtgcaacaggcagacctggcc
ctgaaggaggcttctccgtgctatgaacacacagccaccaatttacctttggtgtcagga
gggcagtgggcactggatgcattaaggaacctggacttgctgaaaaagctgttggtccaa
cagcttggctttgctgagaaggggaccctcgaagaccggcagcgcttccccaggttcagg
accgtctctcaagaggcacaaacagagggtggaagtgagcttggattgcagcactccgac
cataacaaatttcaccagcctggagcagaccccacgcttccaagaagcggaactaacgag
cccacagctcattatggcctccggacttcagctgaatcaccagctccaggagatgccatg
cagctgggagcgagggaccccaggcccagcagtaacttagcgatggaccgcatgggtgtg
aatctggaggtctctgccacggagctggaagggctgggtgctgatgagagtggggagcat
ttctttgatgcccgagaagctcacagtgatgaaaatccatctgaaagtgagctgatggaa
aggaaggacgaggaggatgtgcaaatacggatctcaggaaatgttttgatccttgatgga
tatgaagcagtgcaggagagctccacagatgaggaggtgtcgtctctggttctccagggt
gctgcaggtggccacagctctttggactctgcacagcagcagcccctttccccacgggac
acgcagtcggatgggggcagctccccgtttgcagaggagatgatggtttcccgctgggga
ggagtggaagagccctgcacggttgtagcaaaccctcccttctggtctatagagtcacgc
gtgcagatgatgcagtatattcagaagatagagaataaccttgaaaagttaaaggaggtt
gaggaggactacatcattctccgtcgccaagggctggctgggtcagcctccacaggagag
cactcagagaaaagttag
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integrated database retrieval system
