Lagopus muta (rock ptarmigan): 125703716
Help
Entry
125703716 CDS
T09141
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125703716 (DSCAML1)
Cell adhesion molecules [BR:
lmut04515
]
Immunoglobulin superfamily
Other
125703716 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Ig_6
Receptor_2B4
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
125703716
NCBI-ProteinID:
XP_048824481
LinkDB
All DBs
Position
22:complement(5271413..5350590)
Genome browser
AA seq
2086 aa
AA seq
DB search
MERGQLNRRAFVTTINRCYIKELPISRSVGIFNCASLINYLSGRPSPHLQTGGSAHLVSA
HTEDVGTSLYFVNDSIQQVTFSSTVGVVIPCPAAGSPSAVLRWYLATGDDIYDVPHIRHV
HANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKAVFREPYTVRVEDQRS
MRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGGLYISDVQKEDALSTY
RCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVRAGRLVELPCIASGYPNPA
IRWLKDGRPLPADGRWAKRITGLSIADLRVEDSGTYICEVTNTFGSAEVTGTLTVIDPLR
VTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVVVDDFISIRGISNETLLITAA
QKSHSGAYQCFATRKSQTAQDFSIIMLEDGTPRIVSSFSEKVVNPGEQFSLMCAAKGAPP
PTVTWALDDEPIPRDNGHRTNQYTMSDGTTVSHMNVTSPQIKDGGVYRCTARNSVGSAEY
QARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKDSLLLPDNHRQVVFEN
GTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQPFEFPPASIGQLLYIP
CVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAA
TVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYH
PIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPN
TTIAIKGQSKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAIATKDNGDEVISTLKLKP
ADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSI
ITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKE
LTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQ
YSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPEN
VRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGEMQNITTTRERVELRG
MEKFTNYSVQVLAYTQAGDGVCSSVLYIQTKEDIPGPPAGIKAVPSSASSVVVSWLPPAK
PNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQYMLWVAAVTSAGRGNI
SEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAIKWTKDSEDSAIPVTV
DGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQVPPDQPRLTVSKTSA
SSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKLESLKCGTWYKVKLA
AKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWSSGGCPITAIVLE
YRPKGNWGWQSLRTNSSGEVFLTELREATWYELRMKACNSAGCGNESTQFATLDYDGSTI
PPIKSAQGEGDDVKKLFTIACPIILATLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLIS
KNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTDTEFSQAVNPQ
SFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTKCQAS
TPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYE
HAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTPSEPGICRFTASPPKP
QDSERGKSVAVPIPHRASKSDYCNLPLYVKSDAFFRKPDSHEPCPVVPPREASIRSLARG
YHPPARHLTLDPAAKPPGLPPPSSSSSSSTTLPQRTLPMPTAASTAPAPAPAPAAPAEPP
AATAAATAAHSKVGGSRDSLLEMSTSGAGRAQKQGAGAYSKSYTLV
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgggcagttaaatcgcagggcgtttgtgacaacaatcaatcgatgttacata
aaggaattgcccatttccaggtccgtgggaatttttaattgtgcttctctcatcaattac
ctctctggacgtccgtcgccacatctgcagactgggggaagtgcccaccttgtgtcagct
cacactgaagatgttggaaccagcctctactttgtgaacgactccatccagcaggtcacc
ttctccagcacagtgggggtggtgatcccctgcccggccgcagggtcacccagcgccgtc
cttcggtggtatttggccacaggtgacgacatctacgatgtgccccacatccggcatgtc
catgccaatgggactttgcagctctaccccttctcgccatcagccttcaatagctttatc
cacgacaacgactacttctgcacggcggagaactcggctggcaaaatcaggagcccgaat
atccgtgttaaagcagttttcagggagccgtacaccgtccgggtggaggaccaaaggtcg
atgcgtggaaacgtggctgtcttcaagtgcctcatcccctcctcagtgcaggaatatgtt
agtgttgtgtcctgggaaaaagacaccgtttctatcatcccagaaaataggttttttatt
acttcttatggaggtttgtacatatcggacgtgcagaaggaagatgccttgtccacctac
aggtgtatcaccaagcacaagtacagcggggagacgcggcagagcaacggggccaggctc
tcggtgtcagacccagctgagtccatccccaccatgctagacagcttccagtcacgggag
gtgcgcgcaggccggctggtggagctgccctgcatcgcttcgggataccccaaccctgcc
atccgctggctcaaggacgggcgcccgctgcctgctgacggccgctgggccaaacgcatc
acggggctgagcatcgccgacctgcgtgtggaggacagcgggacctacatctgtgaggtg
accaacaccttcgggtctgcagaggtcacggggaccctcacggtcatcgaccctctgcgt
gtgaccctcacaccaaagaagctcaagacgggcatcggcagcaccgtcatcctctcttgt
gccctcagtgggtcccctgagtacgtcatccgctggtaccgcaacacagacctggtggtg
gtggatgacttcatctccatccggggcatcagcaatgaaaccctcctcatcacagcagca
caaaagagccactctggagcctaccagtgctttgccacccgcaagtcccagacagcacag
gacttctccatcatcatgctggaggatgggaccccccgcatcgtctcctccttcagcgag
aaggtggtgaaccccggggagcagttctccctgatgtgtgccgccaagggcgcgccgccc
ccgaccgtgacctgggccctggacgacgagcccatcccgcgggacaacgggcaccgcacc
aaccagtacaccatgtcggacggcaccacggtgagccacatgaacgtcaccagcccgcag
atcaaggacggcggcgtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaatac
caagcgcgaataaacgtaagaggtcccccgagcatccgggcgatgaagaacataacggcg
gtcgcgggtagggacactttcatcaactgcagggtgatcgggtacccgtattactccatc
aagtggtacaaggactctttgctgctgcccgataaccaccgccaagtggtctttgagaac
gggaccctgaagctgatggacgtccagaaaggcatggacgaaggggagtacctgtgcagc
gtgctgatccagccccagctctccatcagccagagcgtccacgtcacggtgaaagtccct
cctctgatccagccattcgagttcccaccagcctccattgggcagctcctctacatcccc
tgcgtggtctcctctggggacatgcctatccacatcacatggcgcaaggacgggcacgtc
atcctctctggctcaggcgtcaccattgagagcaaggagttcatgagttccctgcagatc
tccagtgtctccctcaagcacaacggcaactacacgtgcatcgccagcaacgccgccgcc
acagtcagccgtgagcggcagctcatcgtgagggtgcctcctcggtttgtggttcaaccc
aacaaccaagatggcatttatggtaaagccggggtgctgaattgctctgttgatgggtac
cctcctcccaaagtgatgtggaaacatgccaaaggcagtgggaacccccagcagtaccac
cccatcccgctgacgggccgcatccagatcctccccaacagctcgctgctgatccgccac
gtgctggaggaggacattggctactacctctgccaggccagcaacggggtgggcacagac
atcagcaagtccatgttcctcaccgtgaagatccccgccatgatcacctcgcaccccaac
accaccatcgccatcaaggggcagagcaaggagctgaactgcacggcgcggggcgagcgg
cccatcatcatccgctgggagaagggagacaccgtcatcgaccccgaccgcaacatgcgc
tacgccatcgccaccaaggacaacggtgacgaggtcatctccaccctcaagctcaaacca
gctgaccgtggggattcagtcttcttctcctgccatgccatcaattcgtacggcgaagac
aggggcctgatccagctcaccgtgcaagagccacctgaccccccagaactggagatccgc
gaggtgaaagcccgcagcatgaacctgcgctggacgcagcgctttgatgggaacagcatc
atcaccggcttcgacatcgagtacaagaacaagtctgattcctgggacttcaagcagtca
acacgaaacatctccccgaccatcaaccaggcgaacatcgtggacctgcaccctgcttcc
gtgtacagcatccgcatgtactccttcaacaagatcgggcgcagcgagcccagcaaggag
ctcaccatcagcacggaggaagcagctcctgacgggcctccgatggatgtcaccttgcag
ccgatgacatcgcagagcatccaggtcacctggaaggccccaaagaaggagctgcagaac
ggggtgatccgtggataccagatcggctaccgcgagaacagcccgggcagcaacgggcag
tacagcatcgtggagatgaaggccacgggcgacagcgaggtctacacactggacaacctg
aagaagtttgcgcagtacggggtggtggtgcaggccttcaaccgcgcggggacggggccg
tcctccagcgagatcaatgccaccacgctggaggatgtgcccagccagcccccggagaac
gtgcgggccatctccatcacgtcggacgtggccgtcatctcctggtcggagcccccgcgc
agtaccctcaatggtgtgctcaagggctaccgggtcatcttctggtccctctacatggac
ggagagtggggtgagatgcagaacatcacaaccacgcgggagagagtggagctgcggggc
atggagaagttcaccaactacagcgtgcaggtgctggcctacacacaggctggtgatggc
gtctgcagcagcgtgctctacatccagaccaaggaggacattccaggtcccccggctggc
atcaaggctgtgccatcctctgccagcagcgtggtggtgtcctggctgcccccagcaaag
cccaacggcatcatccgcaagtacaccatcttctgctccagccccggctccgggcaaccg
gcccccagtgagtatgagaccagcccagatcagctcttctaccgcatcgcacacctgaac
cgtgggcagcagtacatgctgtgggtggctgctgtcacctctgcgggccgtggcaacatc
agtgagaaagtcaccatcgagcctgctgggaaagctccggccaagatcatctcttttgga
ggcactgtcaccacaccctggatgaaggatgtgaggctgccctgcaactcggttggggag
ccggtccctgccatcaaatggaccaaggacagtgaggactctgccatcccagtgacagtg
gatgggcaccgcctgattcaggccaatggcacgctggtgctgcgctcggtgaaggcagag
gactctggctactacacctgcactgccaccaacacctggggcttcgacaccatcatcatc
aacctgctggtgcaagtacccccagaccagcctcgcctgactgtgtccaagacctcggcc
tcctccatcacactggcgtggattcctggggacaacgggggcagctccatccgaggcttc
gtgctgcagtactcggtggacaacagtgaggagtggaaggatgtcttcatcagctcttcc
gagcgctccttcaagctggagagcctcaagtgcggcacctggtacaaggtgaagctggcg
gccaagaacagcgtgggggccgggcgaatcagcgagatcatcgaggccaagacccacggc
agagagccctccttcagcaaggaccagcacctcttcacccacatcaactccacgcatgcc
aggctcaacctgcagggctggagcagcgggggctgccccatcaccgccatcgtcctggag
taccgccccaagggcaactggggctggcagagcctgcgcaccaacagctccggagaggtc
ttcctgaccgagctacgtgaggccacctggtatgagctgcgcatgaaggcctgcaacagc
gcaggctgtggcaatgagagcacgcagttcgccacgttggactacgatggcagcaccatc
ccacccatcaagtctgcgcaaggggaaggggacgatgtgaagaagctgttcaccatcgcc
tgccccatcatcctggccacactgggagtggccctactcttcatcatccgcaagaagagg
aaggagaagcggctgaagcggctgcgagatgccaagagcttggcagagatgctgataagc
aagaataaccgcagctttgacacgccggtgaaggggcccccgcagggcccccgcctgcac
atcgacatcccccgcgtgcagctcctcatcgaggacaaggagggcatcaagcagctggga
gacgacaaagccacgatcccagtgacagacactgagttcagccaagccgtgaatccccag
agcttctgcacaggagtctcattgcatcaccctgccctgatccagaacacggggccgctc
atcgatatgtcggacattcgccccggcaccaaccccgtgtcaaggaagagcgtgaagtct
gctcacagcactcgcaaccgctactcaagccaatggaccctcaccaagtgccaggcgtcc
accccggcgcgcaccctgacctcagactggcggacggtgggctcccagcacggcatcacc
gtcactgagagcgacagctacagcgccagcctctcgcaggacaccgacaagggccggaac
agcatggtgtcaaccgagagcgcctcgtccacctacgaggagctggcgcgcgcctacgag
cacgccaagctggaggagcagctgcagcacgccaagttcgagatcaccgagtgcttcatc
tccgacagctcctcggatcagatgaccacgggcaccacagacaatgccgacagcatgacc
tccatgagcaccccctcagagcccggcatctgtcgcttcaccgcatccccacccaagccc
caagacagtgagcgcggcaagagtgtggccgtgcccatcccacaccgtgccagcaagagc
gattactgcaacctcccgctctacgtcaagtcggacgccttcttccgcaagccagactcc
cacgagccgtgccctgtggtgcctccccgcgaagcctccatccgcagcctggcccgtggt
taccacccccctgcccggcacctgacgctggaccccgccgccaaacccccgggccttcct
cctccctcctcctcctcctcctcctccaccaccttacctcaaaggactctacccatgccc
accgcggccagcaccgcgccggcacccgccccagcgcccgccgcccctgccgagcccccc
gccgccaccgccgccgccaccgccgcgcactccaaggtcgggggctcgcgggactcgctg
ctggagatgagcacgtcgggcgcgggcagggcgcagaagcagggcgccggagcctactcc
aagtcctacacgctggtgtag
DBGET
integrated database retrieval system
