Lagopus muta (rock ptarmigan): 125703791
Help
Entry
125703791 CDS
T09141
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmut01009
]
125703791 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125703791 (SFPQ)
03041 Spliceosome [BR:
lmut03041
]
125703791 (SFPQ)
Protein phosphatases and associated proteins [BR:
lmut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125703791 (SFPQ)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125703791 (SFPQ)
Spliceosome [BR:
lmut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125703791 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
125703791
NCBI-ProteinID:
XP_048824701
LinkDB
All DBs
Position
23:4715026..4729491
Genome browser
AA seq
647 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGPNHDFRSPPPGMGMGQNRGPMGGGPQGPGGPPG
GGPKSEPPKPPASTSAPPSSSSSSSATTAGPAGSQSGPGAPPPSALPAGQPPQQQAQGSA
PSSAPSGPGGQQQPQPKPSPSPTPAGGPKKGQGQSPGGGPKGPGGPQQGPGGPHKGGPGH
RGGPGGEPRGRGQQHQGQQSLSSQQGPAGGDKLSDEGFKANLSLLRRPGEKTYTQRCRLF
VGNLPADITDEDFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGR
QLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPVERAVVIVDDRGRSTGKGIVEFAS
KPAARKAFERCTEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRF
AQPGSFEFEYSQRWKSLDEMEKQQREQVAKNMKDAKDKLESEMEDAYHEHQANLLRQDLM
RRQEELRRMEELHNQEMQKRKEIQLRQEEERRRREEEMMIRQREMEEQMRRQREENYSRM
GYMDPRERDMRMGGATTMNMGDPYASAAQKFPPLGGGGGIGYEANPGVGQAAMSGSMMGS
DMRPERFGQGGAGPVGGQGPRGMGPGTPTGYGRGREEYEGPNKKPRF
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggatcggttccgtagccgtggaggcggcggagggggcttccatcggcgcggc
ggcggcggtggccgcggcggccccaaccacgatttccgctctccgccgcccggcatgggc
atgggccagaaccgcgggcctatggggggcggcccgcagggccccggcggcccgccgggc
ggaggcccgaagtctgaaccgcccaagcctccggcgtcgacctccgctccgccgtcctcg
tcctcttcgtcctccgccaccacggcgggccccgccggcagccagtccggccccggggcg
cctcctccgtccgccctgcccgcggggcagccgccgcagcagcaggcccagggctccgcg
ccctcctccgcgccctccggccccggggggcagcagcagccgcagcccaagccgagcccc
agccccaccccggccggcggccctaagaaaggacaaggacagtcgcccggcggcgggccc
aaggggccaggcgggccgcagcaggggccgggcgggcctcacaagggcgggccgggccac
cgcggcgggccgggcggggagccgaggggccgggggcagcagcaccagggacagcagagt
ctctcctcgcagcagggcccggccggcggcgacaagctttcggacgagggctttaaggca
aacctctcactgctgaggaggcccggggagaagacttacactcagaggtgccgtttgttt
gttgggaatttgcccgccgatataacggatgaagactttaaaaggttgtttgccaaatac
ggggagccgggagaggtttttatcaacaaaggaaaaggctttggcttcattaagttggaa
tctagagctctggcagaaatcgccaaggcagaactggacgacacccccatgcggggccgg
cagctccgcgttcgctttgccacgcacgccgccgcactgtcagtgcgtaacctttctcct
tacgtgtccaacgagttactggaggaagctttctcccagttcggtccggtggagagagct
gttgtgattgtagatgatcgaggtagatcaacgggaaaaggcattgttgagtttgcgtca
aagccagctgccagaaaagcgtttgaacggtgtactgagggagtgttcttgttgacgacc
acccctaggccagtaattgtggaaccgttggagcaactggatgatgaagatggtcttcca
gaaaagcttgctcagaagaacccgatgtaccaaaaggaaagagaaactcctccccgtttt
gctcagcctggcagttttgagtttgaatattcccagagatggaaatctttagatgaaatg
gaaaaacaacagagagaacaagtggcaaaaaacatgaaagatgccaaggacaaactcgag
agtgagatggaagatgcttatcatgagcatcaggcaaacctcttgcgtcaagaccttatg
aggcgtcaggaggaactgagacgtatggaagaactccataatcaggaaatgcagaaacgc
aaggaaattcagctcaggcaggaggaggagcgtcgcagacgggaggaggagatgatgatc
cgtcagcgagagatggaagaacagatgagaaggcagagggaagagaattacagtagaatg
ggttatatggatcccagggagagagacatgagaatgggtggtgccaccacaatgaacatg
ggagatccttatgcttctgcagcccagaaatttccacctcttggaggtggaggcggcata
ggttatgaagctaatccaggagttggccaagcagccatgagtggttctatgatgggaagt
gacatgcgtcctgaacgctttgggcagggaggtgcggggcccgtgggtggccagggtcct
agaggaatggggcctggaacaccaacaggatatggtagagggagagaagaatacgaaggc
ccaaacaaaaagccccgattttag
DBGET
integrated database retrieval system
