Lagopus muta (rock ptarmigan): 125703963
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Entry
125703963 CDS
T09141
Symbol
MATN1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
125703963 (MATN1)
Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
125703963 (MATN1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
Sec23_trunk
EGF_3
Plasmod_Pvs28
EGF_LRP2
EGF
vWA_SIBA-E
hEGF
Motif
Other DBs
NCBI-GeneID:
125703963
NCBI-ProteinID:
XP_048825112
LinkDB
All DBs
Position
23:complement(551291..568213)
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AA seq
493 aa
AA seq
DB search
MDRIFATLPLSLLLLLQSCGVWGAPPQPRGTLCRTKPTDLVFIIDSSRSVRPQEFEKVKV
FLSRVIEGLDVGPNSTRVGVINYASAVKNEFSLKTHQTKAGLLQAVRRIEPLSTGTMTGL
AIQFAISRAFSDAEGARLRSPNINKVAIVVTDGRPQDGVQDVSARARQAGIEIFAIGVGR
VDMHTLRQIASEPLDDHVDYVESYSVIEKLTHKFQEAFCVVSDLCATGDHDCEQICISTP
GSYKCACREGFTLNNDGKTCSACSGGSGSALDLVFLIDGSKSVRPENFELVKKFINQIVE
SLEVSEKQAQVGLVQYSSSVRQEFPLGQFKNKKDIKAAVKKMAYMEKGTMTGQALKYLVD
SSFSIANGARPGVPKVGIVFTDGRSQDYITDAAKKAKDLGFRMFAVGVGNAVEDELREIA
SEPVAEHYFYTADFRTISNIGKKLQMKICVEEDPCECKSIVKFQAKVEELINTLQRKLEA
VAKRIEALENKII
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggacaggattttcgccaccttgccactctccttgctgcttctcctccagagctgtgga
gtctggggggcacctcctcagcccagaggcaccctgtgcagaaccaaacccaccgacctg
gtgttcatcattgacagctctcggagcgtgcgcccgcaggagttcgagaaggtcaaagtc
ttcctgtcgcgcgtgatcgaggggctggacgtgggccccaactccacgcgggtcggggtc
atcaattatgccagcgcagtcaagaatgagttctccctcaagactcaccaaaccaaggcc
gggctcctgcaggcggtccgcaggatagagccgctctccacggggaccatgaccggcctg
gccatccagtttgccatcagccgggccttcagtgacgcagaaggggccaggctcagatct
cccaatattaataaggtggcgattgttgtgactgacggacgtccccaggacggagtgcag
gacgtgtcagcgagggccaggcaggctggcattgagatctttgccatcggggttggccgg
gtggacatgcacacgctgcggcaaatcgcaagcgagcccctggatgaccacgtggactac
gtggagagctacagtgtcatcgagaagctgacccacaagtttcaagaagcattctgtgtg
gtgtcagacctgtgtgccactggtgaccacgactgtgagcagatctgtatcagcaccccg
ggatcatacaagtgtgcttgtagagagggcttcacgctgaacaatgatgggaagacctgc
agtgcttgcagtggtgggtcaggatctgccctggatctcgttttcctgattgatggctcc
aagagcgttcggcctgagaactttgagctggtgaagaaattcatcaaccaaattgtggaa
tccttggaggtgtcagagaagcaagcccaggttggcctggttcagtactccagctctgtc
aggcaggagtttcctctgggacagttcaagaacaagaaggacatcaaagcagcagtcaag
aaaatggcctacatggagaaaggcaccatgacaggccaggctctgaagtacctagtggac
agttccttctccattgctaatggagccaggcctggcgttcccaaggtgggcatcgtcttc
acagacggacggtcacaagattacatcaccgacgctgctaagaaagccaaagatttaggc
tttaggatgtttgctgtgggagtcggtaacgcagtggaggatgagctgagggaaattgct
tccgaaccagtagctgagcactacttctacacagccgacttcagaaccatcagcaacatt
gggaagaagctgcaaatgaaaatctgcgttgaggaagatccatgcgaatgtaaatctatt
gtgaagttccaggcaaaagtagaagaactcatcaatacattgcaacggaaattggaagct
gtggcaaaaaggattgaagccctggagaataaaatcatctaa
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