Lagopus muta (rock ptarmigan): 125703978
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Entry
125703978 CDS
T09141
Symbol
SYF2
Name
(RefSeq) pre-mRNA-splicing factor SYF2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125703978 (SYF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmut03041
]
125703978 (SYF2)
Spliceosome [BR:
lmut03041
]
Complex B
Other components
Prp19-related factors
125703978 (SYF2)
Complex C
125703978 (SYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
SVIP
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
125703978
NCBI-ProteinID:
XP_048825134
LinkDB
All DBs
Position
23:complement(2698423..2700929)
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AA seq
254 aa
AA seq
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MAAAVSALGGLGDVGDGGSSGSEDEAQPSAAAAAAAAAQKREERLRKFRELHLKRNEARK
LNHQEVVEEDKRLKLPPNWEAKKARLEWELKVEEKKKECAARGEDYERVKLLEISAEDAE
RWERKKKRKNPDLGFSDYAAAQLRQYQRLTRQIKPDLEQYEKLKEQYGEALYPTSDSLLH
GTHVPDKEGIDRMVADLEKQIEKREKYSRRRPYNDDADIDYINERNAKFNKKAERFYGKY
TAEIKQNLERGTAV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgtgtcggcgctgggcggtttgggggatgtcggtgacgggggctcctcg
ggctcggaggacgaggcgcagcccagcgcggcggcggcggcggcggcggcggcgcagaag
cgagaagagcggctgcggaagttccgagagctccacttgaagcggaatgaggctcgcaaa
ctgaatcaccaggaagtggtggaggaagacaaaaggctcaagttaccaccgaactgggaa
gccaagaaagctcgactggagtgggagttgaaggtggaggaaaagaagaaggaatgtgca
gcaaggggagaagactacgagcgagttaaactgttagagatcagtgctgaggatgcagag
aggtgggaaaggaaaaagaagaggaaaaatccagatctaggattctcagattatgcagct
gctcagctgcggcagtaccagaggctgaccaggcagatcaaacccgacctggagcagtat
gagaagctgaaggagcagtatggtgaagccctctatccaacatctgacagcctcctccat
ggaactcacgtgccagataaggaagggattgacagaatggttgcagatcttgaaaagcaa
attgagaaacgtgagaagtacagccggaggcgtccttacaacgacgatgcagatattgac
tacatcaatgagagaaatgccaagttcaataagaaggcagagcgcttctatggcaagtac
acagctgagatcaaacagaacttggagagaggaacagctgtgtga
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