Lagopus muta (rock ptarmigan): 125703989
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Entry
125703989 CDS
T09141
Name
(RefSeq) protein argonaute-1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125703989
03036 Chromosome and associated proteins [BR:
lmut03036
]
125703989
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125703989
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125703989
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125703989
microRNA pathway
RISC loading complex
125703989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
125703989
NCBI-ProteinID:
XP_048825180
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Position
23:complement(4509289..4532284)
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AA seq
857 aa
AA seq
DB search
MEAGPSGAAAGAYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGE
GKDRIFKVSIKWMAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGG
RNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAG
MPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGM
ATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPP
AGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPT
RIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNE
RIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQIL
TYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQAL
AKAVQVHQDTLRTMYFA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgggaccttcgggagcagctgcaggcgcttacctgccacccttgcagcaggta
tttcaagcgccgcgtcggcccgggataggaactgttgggaagcccatcaagctcttggcc
aactactttgaagtggacattcccaagatcgacgtgtatcattatgaagtggatatcaag
cctgacaaatgcccccgcagagtcaacagggaagtcgtggagtacatggtacagcacttc
aaacctcagatctttggcgaccggaagccagtctacgatgggaagaaaaacatttacact
gttacggccttacccattggaaatgagagggttgactttgaggtgacaatcccaggagaa
ggcaaggacaggatatttaaggtctctatcaaatggatggccatcgtgagctggcgcatg
ctccacgaagccctggtgagcgggcagatccctgtgcctttggagtctgtccaggcactg
gatgtggccatgaggcacctggcttccatgaggtacaccccggttggccgctccttcttc
tccccccctgaaggctattaccaccccctgggaggtggcagggaggtctggttcggtttc
caccagtccgtcaggcctgccatgtggaagatgatgctcaacattgatgtttctgcaacg
gccttctacaaagcccagcctgtaattgagttcatgtgtgaggtgctggatatccggaac
atcgatgaacaaccgaagccactgacagactcacagagagtgcgtttcaccaaggagatc
aaaggtttgaaggtagaggttacccactgtgggcagatgaagaggaaataccgtgtgtgt
aacgtgacccggcggccggccagccaccagacgtttcccctgcagctggagagcggtcag
acagtggagtgcacagtggctcagtacttcaagcagaaatacaacctgcagctgaaatac
cctcacctcccgtgtctccaggttggccaagagcagaagcacacatacctgcccttggag
gtgtgtaacatcgtggcaggccagcggtgcatcaagaagctcacagacaatcaaacatca
accatgataaaagcaacggccaggtctgccccagacaggcaggaggagatcagccgcctg
atgaagaatgccagctacaacctggatccatacatccaggagtttgggatcaaggtgaag
gatgacatgacggaggtgacggggagggtcctgccggcgcctatcctgcagtatggaggc
aggaaccgagccattgcaactcccaaccagggcgtgtgggacatgcgagggaagcagttc
tacaacggcattgagatcaaagtctgggcgattgcttgctttgccccgcagaagcagtgt
cgagaagaggtgctgaagaactttacagaccagctgcgtaagatctccaaggacgcaggg
atgccgatccagggccagccctgtttctgtaaatatgcccagggtgcagacagtgtggag
cccatgtttcggcacctcaagaacacctattcagggcttcagctcatcattgtcatcctg
ccaggaaaaacaccagtgtacgccgaggtgaagcgtgttggggacactctcctgggaatg
gccacgcagtgcgtccaggtcaagaatgtggtgaaaacctccccacagaccctttccaac
ctctgcctcaagatcaacgtcaagcttggcgggatcaacaacatcctagtgcctcaccag
cgctctgctgtctttcagcaaccagtgatattcctcggggctgatgtcactcacccacct
gctggagatgggaagaaaccctcaataacagctgttgtgggcagcatggacgcccacccc
agccggtactgtgccacggtgcgcgtgcagcgtcctcgccaggaaatcattgaggatctg
tcctacatggtgagggagctcctcatccagttctacaaatccacgcgcttcaaacccacc
aggatcatcttctaccgtgacggtgttcccgaggggcagctcccacagatccttcactat
gagctgctagcaatccgagatgcctgcatcaaactggaaaaggattaccagcctggcatc
acttacatcgttgtccagaaaaggcatcacacccgcctcttctgcgcagacaagaatgag
aggattgggaagagcggaaacatcccagcaggaacaacagtggacacaaacatcacccac
cctttcgagtttgacttttacttgtgcagtcatgcaggcattcagggtacgagccggccc
tcccattactacgtgctctgggatgacaaccggttcacggcagatgagctgcagatcctc
acgtaccagctgtgccatacctacgtgcgctgcactcgctcggtctccatcccagccccg
gcttactacgcccggctggtggcattcagagccaggtaccacctcgtggacaaggagcac
gacagtggcgagggcagccatatatctggacagagcaacggcagagacccccaggccttg
gcgaaggctgtgcaggttcatcaggacactttacgtaccatgtactttgcttga
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