Listeria monocytogenes CFSAN006122: Y193_07830
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Entry
Y193_07830 CDS
T03478
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lmv
Listeria monocytogenes CFSAN006122
Pathway
lmv03030
DNA replication
lmv03430
Mismatch repair
lmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Y193_07830 (dnaE)
03430 Mismatch repair
Y193_07830 (dnaE)
03440 Homologous recombination
Y193_07830 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmv03032
]
Y193_07830 (dnaE)
03400 DNA repair and recombination proteins [BR:
lmv03400
]
Y193_07830 (dnaE)
Enzymes [BR:
lmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Y193_07830 (dnaE)
DNA replication proteins [BR:
lmv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Y193_07830 (dnaE)
DNA repair and recombination proteins [BR:
lmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Y193_07830 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1
tRNA_anti_2
Transcrip_reg
Motif
Other DBs
NCBI-ProteinID:
AHY98221
UniProt:
A0A3T2NWI1
LinkDB
All DBs
Position
complement(1605364..1608690)
Genome browser
AA seq
1108 aa
AA seq
DB search
MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVLYGVVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAESTAGYHELLKIASAIQTREEGPELPQSWLRAYSS
NLIAISPGAKGEIERLLMEENREGALEVYANLVEIFGKESVYLSAQKENPRLFTKIETFS
AEENVPVVATKNVQYIEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQEDMERDWQ
TEFEKRACLETGELADRCHVEIALDQHLLPRFPLNEGQNASDVLRQTAFAGLKERNLLGV
EYQERLEYELKVITEMGFADYFLIVWDVIRYSREAGILTGPGRGSAAGSLVSYALRITDV
DPIRYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLQKALQESPRLENHIKSSKENEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYTRETPLTLADISLEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDVVAVDALYRPGPMEQIDTFIARKHGKEKIQYPHPDLAPILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLNEERIHFVEGAKSRGYSDASANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISM
LAPSINHSNYYFQVENESSIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHK
MLSETVLEALVFSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDDFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGKNYQVAA
YVHEVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADTRN
GELQLIINKAEDLKEIKAPVRLFLKLTEPQQMEQIKPVLTRYKGDSKVIVHQAITKQTAE
LKNIQVTPSNELQEALEELLGKENVVIK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtggggtttgttcatttacaagttgcgagcgcttatgatttgctttcaagtacagcatcg
attgataagctaatcgctaaagcaaaagaataccattatccagccttagcaattacggat
aaaaatgtactttacggagtagtcgagttttatcaaaagtgtttagcggcggatataaaa
ccaattatcgggatgacggtgacaattcaaggttacttaaatccaattaattcatatgag
ttgatattaattgcggaatcaaccgctggatatcacgagttattaaaaatcgcgagtgct
attcaaacgcgcgaagaaggccccgaattgccacaaagctggttacgcgcttatagcagt
aacttgattgcgatttcacctggtgccaaaggagaaatcgaacgtcttctgatggaggag
aatcgcgagggagcactggaagtttatgcaaatttagtcgaaatttttggtaaagaatct
gtttatttatctgcccaaaaagaaaatccacgtcttttcacaaaaatagaaactttttct
gcagaagaaaatgtaccggttgttgcgacgaaaaatgtacaatatatagaaccaaaagat
gcgcaagcaaaagaagttttaacggccattcgtgataatcgaacggtcgattggacaacg
ttaccacttgctggaccaaattattttacctcacaagaagacatggaacgtgattggcaa
acggagttcgaaaaacgggcatgcttagaaactggtgaacttgcagatcgttgtcatgtc
gaaattgctttggatcagcatttattacctagatttccattaaatgaaggacaaaatgca
tcagatgttttgcgtcaaacagcctttgcaggattaaaagaacgaaatttattaggtgtg
gaatatcaggagcgtttagaatatgaattaaaagtcattacggaaatgggttttgcagat
tactttttaatcgtttgggatgttattcgttattcacgcgaggcgggaattttaacaggt
ccaggtcggggctctgcggcggggtcgcttgtttcctatgcactcagaattacggatgta
gacccaattcgttacaatttgctatttgaacgatttttaaacccagaacgtatcacgatg
cccgatattgatttggattttccagataatcgccgtgatgaagtgatttcgtatgtggta
tctaaatacggagaagcgcatgtggcgcaaatcggcacgtttggaacactagcggcaaaa
gcggcgattcgcgatactgcgaggagttttgggctaaattctgtactattatctgaatgg
tctaagttgattccaagtcagttaggtattacgttacaaaaagcactacaagaaagtccg
cgtttagaaaaccatattaaaagctctaaagaaaatgaaatgatttgggaagttgcttgt
caactggaaggcttgccacgtcatatttcaacgcacgcagccggaatagttattagtgac
aagccactcgtagaacaagtcgcgctacaattaggtagcggagatgcacgtttgacccag
tttgctatgggagaattagagaaaatcggcttacttaaaatggactttttaggacttaga
aatcttagtttacttgatcgtgttttgaaatcagtcaattatactagagaaactccgtta
acattagcagatatttccttagaagataaaaaaacattgaaactattccaaacaggtgac
acgacaggggtattccaatttgaatcggacgggattcgacgcgtgctccgaaaattaaaa
ccaacttcttttgaagatgtcgtggcggtagatgcgctttatcgtccgggtccaatggaa
caaattgatacatttatcgctagaaaacacggaaaagaaaaaattcaatatcctcatcca
gatttagcgcctattttggaagtgacatacggcgttatcgtttatcaagagcaaattatt
caagtagcgaaccaaatggctggattttcgcttggagaagcagatttattaagacgagcg
gtcagcaagaaaaaagcagatgtcctaaacgaagagcgaattcactttgtggaaggtgct
aagagtagaggttattcagatgctagcgctaaccaagtgtatgatatgattgttcaattc
gcgaattacggtttcaaccgaagtcacgctgcagcatattcaaaaatcgcttttcaatta
gcttatttaaaagcacattttccagctgcatttatgtcgtcgcttcttagctctgttttt
ggcaatgacgacaaaatttcccagtacattaccgaagcaaaaaactacggaattagcatg
ttagcgccaagcatcaaccatagtaattactacttccaagtggagaatgaatcatctatc
cgctatagtttccgtgttattcgtaaagtgccaacgaaattcattttagaaattattaac
gaacgaaaaaaagcacctttccgagatttctttgatttttgtgaaagaatgccacataaa
atgctctcagaaaccgttttagaagcacttgtattttctgggtgttttgacgaatttggc
gaggatcgagcaacgattttggcaaccattgatgcagtgctacaatatatttcgctactc
ggtgaagattcgaaaggaatgaatcttttcgcggaagatgatgactttttgaaaaagatg
aaaccacgctaccggaaaaccgcgcccatttcgattgacgaaaagctggagaaagaaaaa
ttatacacgggtcaatacgtttcagcgcatccagtatcgtactaccaaaataaattacaa
aatcttgctattacaagacttgcaaatctttcttccggcaaaaactatcaagtagctgct
tatgtacatgaagtcaaatcaattagaacaaaaaagggcgaaacgatgtgctttttaaca
attagtgatgattcaaaagaactgagcgccgtcatgttcccggaaagttatcgtaaattc
gcgagctttgcacaaaaaggggagattctctttttgcaagtcaaagcagacacaaggaac
ggagagctacagttaattatcaataaagcagaagatttaaaagaaataaaagcccccgta
cgattgttcctaaaattaacggaaccacagcaaatggaacaaattaagccagttttaacg
cgttataaaggcgacagtaaggtcattgtgcatcaagcaataacgaaacaaactgctgag
ctgaaaaatattcaagtaacgccatcaaatgagctgcaagaagcgttagaagagctactc
ggtaaagagaatgtagtcattaagtaa
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