Listeria monocytogenes SLCC2755 (serotype 1/2b): LMOSLCC2755_2002
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Entry
LMOSLCC2755_2002 CDS
T02219
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lmw
Listeria monocytogenes SLCC2755 (serotype 1/2b)
Pathway
lmw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMOSLCC2755_2002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmw03019
]
LMOSLCC2755_2002
03400 DNA repair and recombination proteins [BR:
lmw03400
]
LMOSLCC2755_2002
Enzymes [BR:
lmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMOSLCC2755_2002
Messenger RNA biogenesis [BR:
lmw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMOSLCC2755_2002
DNA repair and recombination proteins [BR:
lmw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LMOSLCC2755_2002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
Metal_CEHH
Cas3-like_C_2
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
CBY49594
LinkDB
All DBs
Position
complement(2055156..2056559)
Genome browser
AA seq
467 aa
AA seq
DB search
MNLEKELKEYLGFDEFRPGQKEVIETALAKRNCFAMLPTGTGKTICYQLAGHLMDGLVLI
VSPLLSLMQDQMERMRAHGEKRVAALNSFLKREEKGQVLANIHLYKFIFLSPEMLNNETV
KNLLLKQRISLFVIDEAHCISQWGHDFRPDYLMLGKFIQEAEFPVTMVLTATATKKVRAD
ILTQLHLTDCAQIVYSVNRPNISLQVEKFSNQHVKKDRLYALVRKLQTPGIIYFSSKKLA
ESTAHELSEIADLRVAYYHGDMDTEDRIIIQQQFVYGQLDVICATSAFGMGIDKADIRYV
IHYHMPADLEAYLQEIGRAGRDGENSVAILLYANGDEFIQMQLADQDIPDANLMNLTNEQ
RKTLPETEQRFIEYYQRSGLSTKELTDKMDYRKKWKRANLQQFIGYLHTTDCRRNYILRY
FEETPLEVTPENCCDLDGAEIIDFEKRPITQQKEIPTWEAYLAYLLQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgaacttagaaaaggaattaaaagaatatcttggttttgatgagttccgccctggccaa
aaagaagtaattgaaacagctttagcaaagcgaaattgttttgctatgttacctactgga
acaggaaaaaccatttgttatcaattagcgggtcatttgatggatggattagtattgatt
gtttctccacttctctcccttatgcaagatcaaatggagcgaatgcgtgctcacggagaa
aagcgagtagcagcgcttaatagctttttaaaacgagaagaaaaagggcaagtccttgca
aacattcatttatataaatttatttttttatcaccagaaatgctaaataatgaaacggtg
aaaaacttactattaaaacaaagaatcagcttatttgtcatagatgaagcgcattgcatt
tcgcagtggggacatgattttcgccctgattatttgatgttaggtaagttcattcaagaa
gccgaatttcctgtgactatggtgctgacagctacggcaaccaagaaagttagagcagat
attttaacgcaattacatctaacggattgtgcgcaaattgtttattctgttaatcgaccg
aatatttctttacaagtggagaaattttctaaccagcatgtaaaaaaagaccgtttatat
gcgcttgttcgcaaactacaaacacccggaattatttatttttctagtaaaaaattagcg
gaaagcactgcgcatgaattaagcgaaattgctgatttaagagtagcttattatcacggg
gatatggatacagaagatagaattattattcagcaacaatttgtttacgggcagctggat
gttatttgcgccactagcgcatttggaatggggatagataaagctgacattcgctatgtt
attcattatcatatgcctgcagatttggaagcatatttgcaagaaattggtcgagcaggt
cgtgatggcgaaaacagtgtggcgattctcttatacgcgaatggagatgaattcattcaa
atgcaattagccgatcaagatatcccagatgccaacttaatgaatctgacgaatgaacaa
cgcaaaacgttacctgaaacagagcaacgttttattgaatactaccaaagaagtggttta
agtacgaaagaattaaccgacaaaatggattatcgaaaaaaatggaagcgggctaattta
caacaatttattgggtatctgcatacaacggattgtcgccgtaattatattctacgatac
tttgaagaaacgccgttagaagtcaccccagaaaactgttgtgatttggatggagcagaa
ataatcgattttgaaaaaagaccaataacacagcaaaaagaaattccaacatgggaagct
tatttagcttatttattgcaatag
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