Listeria monocytogenes SLCC2372 (serotype 1/2c): LMOSLCC2372_1628
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Entry
LMOSLCC2372_1628 CDS
T02220
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lmx
Listeria monocytogenes SLCC2372 (serotype 1/2c)
Pathway
lmx03030
DNA replication
lmx03410
Base excision repair
lmx03420
Nucleotide excision repair
lmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMOSLCC2372_1628 (polA)
03410 Base excision repair
LMOSLCC2372_1628 (polA)
03420 Nucleotide excision repair
LMOSLCC2372_1628 (polA)
03440 Homologous recombination
LMOSLCC2372_1628 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmx03032
]
LMOSLCC2372_1628 (polA)
03400 DNA repair and recombination proteins [BR:
lmx03400
]
LMOSLCC2372_1628 (polA)
Enzymes [BR:
lmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMOSLCC2372_1628 (polA)
DNA replication proteins [BR:
lmx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LMOSLCC2372_1628 (polA)
DNA repair and recombination proteins [BR:
lmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LMOSLCC2372_1628 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMOSLCC2372_1628 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
LTD
NYN_YacP
XPG_I
Enkurin
FeoB_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CBY54963
LinkDB
All DBs
Position
complement(1622203..1624860)
Genome browser
AA seq
885 aa
AA seq
DB search
MNDNIEEDIPVNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKP
SHVLVAFDAGKTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEAD
DIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNTPETLKEKYNL
TPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKV
LENKELAILSKELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTP
EESKELKELSFEIVTELKEQHFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKET
AESSEAFRKWVESDQTKVVYDAKKTIVAMNRIGLAISGITFDIMLASYLLNPSDSIDDFT
SVAVRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEKNEQL
ALMEDLELPLTFVLAEMEMQGVSVDTDRLEDMKVELGGRLKTLEASIHSLAGEEFNINSP
KQLGVILFEKLELPPVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGL
LKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSKPGWKMFS
ADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEKEEVDSLMRRQAKAVNFG
IVYGISDYGLSQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRR
YIPEIVSRNFNVRGFAERTAMNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDE
LIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgacaatatcgaggaggatatccctgtgaataaattagtattaattgatggaaat
agtattgcgaatcgcgctttttatgcgttaccacttttaaataacgataaaggtgtttac
acaaatgcggtgtatggattcgcaatgatgttgatgaatgtactcgaaaaagaaaaaccc
agccatgtgctcgttgcatttgatgctggaaaaacaacttttagacatacaacatttaaa
ggttataaaggcggacgtcaaaaaaccccaagtgagttatctgaacagtttccattcatc
cgagagcttttaacggcgtatgatatcccgcaatatgaactggccaattacgaggcagac
gatattatcggaacattgacgaaaaaagcggaagcagatggaatggaagttgcaattatt
accggagaccgcgatttaacacaattagcttctgaaaaaacaacggtttatattactaaa
aaaggcatagccgatatggaaaccaacacaccagaaacactaaaagaaaaatacaatcta
actcctgaacaaatcattgatatgaaaggtttaatgggagattcctccgataatattcct
gggattccaggcgttggtgaaaaaacagccttaaaactcttacatgaatttggcggaacg
gtggaaagtgtgttagagcacgccgaggaaatttccggtaaaaaactaaaagaaaaagta
ctagaaaataaagaattagctattttaagtaaagagctagctacaatcaatgtggattca
ccgattgaatgcacagtcgaaagcacgaaatatgacgggtatcaaactgaaaaagttatc
cctttattaaaagaaatgaattttacaacacttttgaaaaatatcgaaggagatacaccg
gaggaatcgaaagaactaaaagaattgtcttttgaaatagtaacggaattaaaagaacaa
cattttggtgggaaaaccgcactttatgtggagctagaaaatgataattaccatacagca
aacttcatcgggctgacagtacattccagccaaggaacgtatttctttacaaaagaaaca
gctgaaagtagtgaggcattccgcaaatgggtagaaagtgatcaaacaaaagtagtgtat
gatgcgaagaaaacaatagttgcaatgaaccgcattggtttggcaatttctggtatcaca
tttgatatcatgttagcatcttacttgttaaatccatctgattcaattgatgattttaca
agtgttgcagtaagacatgattacacagaagtagaaacagatgaagcagtctacggaaaa
ggtgctaaacgtagcactcctgaagaaagcattgttgcggcacacttagctaggaaagca
gtggccattgctgacttagagaaaagactagttgatgatttagagaaaaatgaacaacta
gctttgatggaagacctagagctaccactaacatttgttttagcagaaatggagatgcaa
ggagtcagcgtagatacagatcggcttgaagatatgaaagtagagctgggtggaagacta
aaaacattagaagcatccattcattcactagctggcgaagaattcaatattaattcaccg
aaacaactaggtgtaattttatttgaaaagctggaacttcccccagtcaagaaaacaaaa
acaggctattcaacagctgcggatgtactggaaagtttgtctggaaaacacgcgattatt
gatgaaattttgttatatcgtcaacttggtaaaattcagtccacttatatcgaagggctg
cttaaagtgacggataaagaaacacataaggtccatacacgtttcaaccaaacattaacg
caaacgggacgtttaagttcagtcgatccgaacttacaaaatatcccgattcgtttagaa
gaaggtcggaaaatcagacaagtttttgtgccgagtaaacctggttggaaaatgttttca
gccgattattctcaagtagagttgcgagttttagcacatatttctgaagatgagaattta
atttatgcatttaagcacgattacgatatccatacgaaaacagccatggacgtgtttcat
gtggagaaggaagaagtggattcactaatgcgccgtcaagctaaagcagtaaactttggt
attgtatatggtattagtgattatgggctttcgcaaaaccttggtattacgcgtaaagaa
gcaaaagactttattgatcgttactttgtgagttatccagccgtgaaagaatatatgcaa
gacattgtccgttttgcgaaagaaaaaggctatgtagagaccattttacatcgtcgtcgt
tatattccggagattgttagtcgtaattttaatgttcgcggatttgcagaaagaactgcg
atgaacacacctattcaaggtagtgccgctgatattatcaaaaaagcgatgattctgatg
agcgagcgtttagtatctgaaaaattagaagcaaaattattacttcaagtgcacgatgaa
ttaatcttcgaagcacctgaagctgaaatagctaaattagaagaaattgtcccagatgtt
atggaaaatgcagtagagctttctgtgccgcttaaagtagatagcgcctttggtgacact
tggtacgacgcgaaataa
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