Listeria monocytogenes 08-5923 (serotype 1/2a): LM5923_1412
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Entry
LM5923_1412 CDS
T01164
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lmy
Listeria monocytogenes 08-5923 (serotype 1/2a)
Pathway
lmy03030
DNA replication
lmy03430
Mismatch repair
lmy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LM5923_1412 (polC)
03430 Mismatch repair
LM5923_1412 (polC)
03440 Homologous recombination
LM5923_1412 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmy03032
]
LM5923_1412 (polC)
03400 DNA repair and recombination proteins [BR:
lmy03400
]
LM5923_1412 (polC)
Enzymes [BR:
lmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LM5923_1412 (polC)
DNA replication proteins [BR:
lmy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LM5923_1412 (polC)
DNA repair and recombination proteins [BR:
lmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LM5923_1412 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
Rv2179c-like
RNase_H_2
DEDDh_C
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ADB71253
LinkDB
All DBs
Position
1382641..1386975
Genome browser
AA seq
1444 aa
AA seq
DB search
MTAKEEEKQERFQLLMTQIGLQDVTTYEEFTKDAKIEKLVADKKNKTWQFHLHVPQIFPA
ALFHMMDVGMKRAFSQIAETEMQIVPENQTINETLIQDYWNLIVEPIGKQSPMIGKLLME
QKPTFKEPHFIEVAVHNDMEEATIQQRFQTKIIESYGKAGFPRLAMKMHMLDQSETDEYK
AFAQAKQEEDQKKAAEAVQVMQKRQAEGQSGGGGAAPLTGPFQIGYKIKDDEEVKRLGDI
YDEERRITVQGLIFATEIRELRSGRSLLQFKITDYTSSMIIKMFSRDNEDAAMFQNLKKG
MWVKVRGSVQNDTFVRDLIMMAQDVNEIAGVKRLDTAEEKRAELHLHSPMSQMDATSSVD
SLFKQAADWGHKAIAITDHSVAQSFPEAYGAGQKYGLKVIFGIEANLIDDGVPIAYNDQH
IALEDATYCVFDVETTGLSAVYDTIIELAGVKMKNGEIIDKFEAFIDPGHPLSATTINLT
GITDDMVKGSDPIDVVLKRFKEWSGDDILVAHNASFDMGFINTAYEKVGLEKAENAVVDT
LELARFLYPHFKNHRLNTLTKKFNIILEQHHRAVFDAEATAYLAWKLIKDAKEMHNIDFH
DSLNDYMGEGDAYKRARPFHATIYAQTAVGLKNLFKLITMSNINYFYRVPRIPRSQLKKL
REGLIIGTACSQGELFEAMMQKGMQAAEKVAEFYDFIEVQPKPVYAPLIERELVRDEKAL
EEILKNIVRVGEKTGKPVVATGNVHYKDPVDKIYRKILIHSQGGANPLNRAELPDVHFRT
TDEMLKEFAFLGEEKAKEIVVTNANLVVDWMENLKPIKDELYTPKIDGAEDEVRNMSYAM
AHQLYGEKLPEIVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSF
VATMTEITEVNPLPPHYLCPNCKDSEFFDDGSVGSGFDLPDKDCPHCGTAYQKEGQDIPF
ETFLGFKGDKVPDIDLNFSGDYQPVAHAYTKEIFGEDYVFRAGTIGTVAEKTAFGYVRNY
ERDMNMTIRGAEIDRLVAGCTGVKRTTGQHPGGIIVIPDYMDVYDFTPVQFPADATDSEW
KTTHFDFHSIHDNVLKLDILGHDDPTAIRMLQDLSGIDPKTIPTDDPDVMKLFGSTESLG
VKPADIDSKTGTLGIPEFGTRFVRQMLEQTKPTTFSELVQISGLSHGTDVWLGNAEELIK
NKTCELPDVIGCRDDIMVFLIYQGLESSLAFKIMESVRKGKGLTDEMEEAMMANKVPLWY
IESCKKIKYMFPKAHAAAYVLMAVRIAYFKVHYPLYFYATYFTVRADDFDLTSMVNGKEA
VKATMKEVNDKGMEASTKEKNLLTVLEIANEMLARGFHFQKVDLYKSSADEFIIDGDSLI
PPFNAIPSLGTNVAKQIVAARENGEFLSKEDLQQRGKVSKTIIQYMDDQGCLEGLPDQNQ
LSLF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaaagaggaagaaaaacaagaacgatttcagctgttaatgacacaaatcggt
ttacaagatgtaacaacctacgaagaatttacaaaagatgctaaaatcgaaaaactcgtt
gccgataagaaaaataaaacatggcaatttcatttacacgttccacaaatttttccagca
gcacttttccatatgatggatgttggaatgaaacgcgcattcagccaaatcgcggaaaca
gaaatgcaaattgttccagaaaatcaaacaatcaacgaaacgctcattcaagattattgg
aacttaatcgtagagccaattggaaagcagtcaccgatgattggaaagcttttaatggag
caaaaacctacatttaaagaaccccattttattgaagtagcagtccataatgacatggaa
gaagcgactattcagcaacgattccagacgaaaattattgaaagttatgggaaagctgga
tttccacgtctagcaatgaaaatgcacatgcttgaccagtctgaaacagatgaatataaa
gcttttgcacaggccaaacaagaagaagatcagaaaaaagccgctgaagctgtgcaagtt
atgcaaaaacgacaagcagaagggcaaagcggtggcggtggagcagctccactaacaggt
ccgttccaaattggttataaaattaaagacgatgaagaagttaaacgtcttggggacatt
tatgatgaagaacgacgtattacagttcaaggcttaatctttgcgacagaaattagagag
cttcgcagtggtcgtagtttgttacaattcaaaattaccgattatacaagttcaatgatt
ataaaaatgttttctcgtgataacgaggatgcggcgatgttccaaaatttgaaaaaaggt
atgtgggttaaagttcgaggaagcgttcaaaacgatactttcgtgcgtgacttaatcatg
atggcgcaagatgtcaatgaaatcgctggagtgaagcgtcttgatactgctgaagaaaaa
cgcgcagaactacatcttcattcaccgatgagtcaaatggatgccacttcatctgttgat
tcactgttcaaacaagctgctgattggggacacaaagcaatcgctattactgatcattcc
gttgcccaatctttcccagaagcgtatggagcagggcaaaagtatggcttaaaagttatt
tttggcatcgaagcaaatctcatagatgatggcgtgccaatcgcttataacgatcaacat
attgctttggaagatgcaacatattgcgtatttgacgttgaaacaacaggtttatccgct
gtttatgatacgatcatcgaacttgctggcgtaaaaatgaaaaatggtgaaattattgat
aaatttgaagcttttattgatccaggacacccactttctgcaactactattaatttaact
ggtattacagatgacatggtaaaaggttctgatcccattgatgttgttttaaaacgattt
aaagaatggagcggcgatgatattcttgtggctcacaacgcttcatttgacatgggcttt
attaacactgcttatgaaaaagttgggctagaaaaggcagaaaatgcggttgtcgataca
ttggaattagctcgttttctttacccgcattttaaaaatcatcgcttgaataccttaact
aagaaattcaatattattcttgaacaacatcaccgagctgtatttgatgctgaggctaca
gcatatttagcttggaaattaattaaagatgcgaaagaaatgcacaacatcgatttccat
gattctttaaatgactatatgggagaaggcgacgcatacaagcgtgcgcgaccattccac
gccacaatttacgcacaaacggctgttggtttgaagaatctctttaaattaattacgatg
tccaatattaattacttttaccgtgtgcctcgtattcctcgttctcagctaaagaaatta
cgtgaaggtttaattattggaactgcttgtagccaaggagaactatttgaagcaatgatg
caaaaagggatgcaagcggcagaaaaagtagcagagttctatgatttcattgaagttcaa
ccgaagccagtttatgcaccgcttattgaacgtgaactagttcgtgacgaaaaagcttta
gaagaaatattgaaaaatatcgtccgcgttggtgaaaaaactggaaaacctgtcgttgca
acaggtaatgtacattacaaagatccagtggataaaatttatcgtaaaattttaatccat
tcgcaaggaggagcaaatccgcttaatcgtgctgaattaccagatgttcatttccgtaca
acggatgaaatgttgaaagaatttgccttcttgggtgaagaaaaagcaaaagaaattgtt
gtaactaatgcgaatttagttgtcgattggatggaaaatcttaaaccaatcaaagacgaa
ttatacacgccgaagattgatggcgcagaagatgaagttcggaatatgagctatgcgatg
gcgcatcaactttacggtgagaaactgccagaaatcgtagaagctcgactagaaaaagaa
ctgaaaagtattatcggacacgggtttgcggttatttatctcatttcacataagcttgtt
aagaaatcacttgtagatggctatctagttggttcgcggggatcggtcggttcttctttc
gttgcgacaatgacggaaattaccgaagtaaacccacttccaccgcattatctttgcccg
aattgtaaggattctgagttctttgatgatggttcggttggttctggttttgacttacct
gataaagattgtccacattgcggaactgcttatcaaaaagaagggcaagacattccattt
gaaactttcttagggtttaaaggggataaagtacctgatattgacttgaacttttcagga
gattatcaaccggtagcccatgcttatacaaaagaaatttttggtgaagattacgttttc
cgtgcggggacgattggtaccgttgcagagaaaacagcttttggttatgttcgaaattat
gagcgagatatgaatatgactattcgcggggcagaaattgaccgacttgtagctggttgt
acaggcgttaaacgaactaccggacaacatccaggtggtattatcgttattccagattat
atggatgtttacgattttacaccggtacagttcccagctgatgcgacggactcagaatgg
aaaacgacccattttgactttcactcgattcatgataacgtattaaaactagatatactt
ggacacgatgatccgactgctatccggatgttacaggatttaagcggtattgatccaaaa
acaatcccaaccgatgatccagatgttatgaaactatttggatctacagagtcacttggt
gttaaaccagcagatattgattcaaaaacaggaacattaggaatccccgaatttgggacg
cgttttgttcgacaaatgctagaacaaactaaaccaacaacattttctgagctagtgcaa
atctccggtctttcccacgggacggacgtttggcttggtaatgcggaagaattaatcaaa
aataaaacatgcgaactgccagatgtaattggttgtcgtgatgatattatggttttctta
atttatcaaggactagaaagttcattagcctttaagattatggagtctgtgcgtaaaggg
aaagggttaacagatgaaatggaagaagcaatgatggcgaataaagtaccgctttggtac
attgaatcttgtaaaaaaatcaagtacatgttccctaaagcccatgctgctgcttatgtt
ttaatggcagtacggattgcttatttcaaagtacattatccactatacttctatgcgact
tatttcaccgttcgtgccgacgattttgatttaacatcgatggtaaacggaaaagaagcc
gtgaaagcaacgatgaaggaagtaaacgataaaggaatggaagcttcaaccaaagagaaa
aacttattaactgttctagaaattgcgaatgaaatgcttgctcgtggtttccatttccaa
aaagtcgatttatataaatcgtctgctgatgagttcattattgacggagactcacttatt
ccaccattcaatgcgattccaagtcttggaaccaacgtagcaaaacaaatcgttgccgct
cgtgaaaatggagaatttttatccaaagaagacttgcaacaacgtggaaaagtgtcgaaa
acgattattcagtacatggatgatcaaggatgcttggaaggattgcctgatcaaaatcag
ttgtcactattctaa
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integrated database retrieval system
