Listeria monocytogenes 08-5923 (serotype 1/2a): LM5923_1544
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Entry
LM5923_1544 CDS
T01164
Name
(GenBank) hypothetical protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lmy
Listeria monocytogenes 08-5923 (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmy03019
]
LM5923_1544
03009 Ribosome biogenesis [BR:
lmy03009
]
LM5923_1544
Enzymes [BR:
lmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LM5923_1544
Messenger RNA biogenesis [BR:
lmy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LM5923_1544
Ribosome biogenesis [BR:
lmy03009
]
Prokaryotic type
rRNA helicases
LM5923_1544
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ADB71385
LinkDB
All DBs
Position
complement(1517791..1519098)
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AA seq
435 aa
AA seq
DB search
MTKKSRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGESIIGQSQTGTGKTHTFI
LPIINNVNPEKDAVQAVITAPSRELATQIYNEIRKVTKYSEKEIAVQLVIGGTDKQRAID
KLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADMTLDMGFLNDVDHIAGKMPAN
LQMLVFSATIPQKLKPFLSKYMENPRYEHIQPKVAASKTVEHRIMATRSRNKLDLLKNVL
VGSQPYLAIVFTNTKTTADEVANGLIERGLKVAKIHGDVNPRERKRTMKQIENLDYQYVV
ATDLAARGIDIQGISHVVNYELPDDLDFYIHRTGRTGRAGHSGIALTLFEPADEDRLNQL
EKMGIEFKHVDWKNKEFVTLEDRNRRAKREAKRETADPREIGMRKKAKQKGKPNYKKKIN
YKMNEIKRRERRKKR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaaatcaaggtttgaccaatttggctttcaaccttttattgggcttgcaata
gataaattaggattctatgagccaacagaagtacaacagaagctaatcccaggtatttta
aaaggtgaaagtatcattggccaatctcaaacaggtacagggaaaacccatacttttatt
ttgccaattattaacaatgtgaatcctgaaaaagatgcagtacaagcggttattacggca
ccaagtcgtgagcttgctactcaaatttataatgaaattcgcaaagtaaccaaatacagt
gaaaaagaaatcgctgtacaactcgttattggtggtacggacaaacaacgtgcaattgat
aaactaaaaaaacagccacaaattattgtcggaacgcctggtcgtatcaatgacttaatc
cgtgaacaagctttatttgttcatacggcgaaaacgttagttattgacgaagcagacatg
acacttgatatgggcttcttaaatgatgttgaccatatcgctggaaaaatgccagctaat
ttacaaatgcttgttttttccgcaacaattccgcaaaaattaaaaccatttttaagcaaa
tatatggaaaatccgcgttatgagcatatccaaccaaaagtggctgcttcaaaaacggtg
gaacatcgcattatggccactcgtagccgtaataaacttgatttacttaaaaatgtttta
gttggttcgcaaccttatttggcgattgtttttactaatacgaaaacaacagctgatgaa
gtagcaaacggattaatcgaacgtggacttaaagtagccaaaattcatggtgacgtcaac
ccgcgtgaacgtaaacgtacaatgaaacaaatcgaaaacttagattaccaatatgtcgtt
gcgacagatttagctgcccgtggtattgatatccaaggaattagtcatgtcgtgaactat
gagttgccagatgacttagatttctacattcaccgcacaggtcgtactggtcgcgccgga
cattctggtatcgcacttactttattcgaaccagctgacgaagatcgtctaaaccaactc
gaaaaaatgggtattgagtttaaacacgttgactggaaaaataaagaatttgttacactc
gaagaccgtaaccgtcgtgcaaaacgtgaagcaaaacgcgaaacagctgacccacgtgaa
attggtatgcgtaaaaaagcaaaacaaaaaggtaaaccaaactataaaaagaaaattaac
tacaaaatgaacgaaattaaacgtcgcgaaagacggaaaaaacgataa
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