Listeria monocytogenes 08-5923 (serotype 1/2a): LM5923_1988
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Entry
LM5923_1988 CDS
T01164
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lmy
Listeria monocytogenes 08-5923 (serotype 1/2a)
Pathway
lmy00220
Arginine biosynthesis
lmy00240
Pyrimidine metabolism
lmy00250
Alanine, aspartate and glutamate metabolism
lmy01100
Metabolic pathways
lmy01110
Biosynthesis of secondary metabolites
lmy01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lmy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LM5923_1988 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LM5923_1988 (carB)
00220 Arginine biosynthesis
LM5923_1988 (carB)
Enzymes [BR:
lmy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LM5923_1988 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_5
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ADB71829
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Position
complement(1994796..1998008)
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AA seq
1070 aa
AA seq
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MPKRDDIKTILVIGSGPIVIGQAAEFDYAGTQACLSLKEEGYRVVLVNSNPATIMTDAEM
ADKVYIEPITLDFVSRIIRKERPDAILPTLGGQTGLNMAMELSAAGILDECNVEVLGTDL
TAIKKAEDREAFRDLMNELGEPVPESDIIHNLDEAYAFVERIGYPVIVRPAYTLGGSGGG
ICHNEQELIETVTSGLKLSPVTQCLLEKSIAGFKEVEYEVMRDANNNAMVVCNMENIDPV
GIHTGDSIVVAPSQTLSDREYQLLRDVSLKIIRALEIEGGCNVQLALDPDSYNYYVIEVN
PRVSRSSALASKATGYPIAKLAAKIAVGLTLDEVRNPVTGTTFAHFEPTLDYVVAKIPRF
AFDKFEQADRRLGTQMKATGEVMAIGRSWEEALLKAVRSLEIGADHLLLEEAENADEATL
ERKICFPEDDRLFFLAAALRRGQTIEQLHEKTKIDLFFLYKLSKTIELENRIKENPQNQE
ILAEAKQAGFSDAFLATCWNVDEQAIYDLRKAQNLFPVYKMVDTCAAEFESTTPYFYSTY
EEENESTRSAKESVIVLGSGPIRIGQGVEFDYATVHSVWAIQQAGYEAIIINNNPETVST
DFSISDKLYFEPLTLEDVMHVIEIEQPLGVVVQFGGQTAINLADGLAKRGVKILGTSLED
TDRAENRDAFEKALEILQIPQPAGKTATSVEEAITVATDIGYPVLVRPSYVLGGRAMEIV
ESEEALKHYMTNAVKVNPKHPVLVDRYVSGQEVEVDAISDGVNVLIPGIMEHIERAGVHS
GDSIAVYPAQRLSIQVKNTIVDYTTRLATGLNIIGMLNIQYVVDGEEVFVIEVNPRSSRT
APFLSKITEIPMANVATRVILGENLIDLGYTPGLAPEKQEIFVKVPVFSFAKLRSVDTSL
GPEMKSTGEVMGKDVTLEKALYKGFVASGTTMHDYGTVLLTVADRDKEEAVELAKRFNRI
GFTIMATKGTASTLEEASIPVSQVKKIGENQETLIDYIRNGQVTLVVNTLTTGKRPERDG
FQIRRESVENGIPVCTSLDTAEAILRVLESRSFELESMNASEVKQPKSRV
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgcgacgatataaaaacaattctagtaatcggttctggcccaattgttatt
ggacaggcggcagagtttgattatgctggaacacaagcttgcctgagtttgaaagaagaa
gggtaccgggtagttttagtgaactcgaatccagcgacgattatgacagatgcagaaatg
gcagataaagtttacattgagccaataaccctcgattttgtatcacgcattattcgaaaa
gaacgcccggatgccattttaccaacgcttgggggacaaacggggttgaatatggcaatg
gaactttctgctgctggaatcttggatgaatgtaacgtagaagtacttgggacggattta
acggcgattaaaaaagcggaagaccgtgaagcattccgagacttgatgaatgagctagga
gaaccagtgccagaaagcgacattattcataatttggacgaagcttatgcttttgttgaa
cgtatcggctacccagttatcgttcgcccagcatatacgcttggtggctcgggtggcggg
atttgccacaatgaacaagaattaattgaaacggtgacaagtggtttaaaactgagtcca
gtaacacaatgtttactagaaaaaagtatcgctggttttaaagaagtggaatatgaagta
atgcgtgatgcgaacaataacgcaatggttgtttgtaacatggaaaatattgacccagtc
ggcatacatacaggcgattcgattgttgtcgcaccaagccaaacgctttccgaccgcgaa
taccaattgttgcgagatgtgtcgttgaaaattatccgcgcactagaaattgaaggtggc
tgtaacgttcagctggcactcgatccagatagttataactattacgttattgaagtaaac
ccacgtgtgagtcgttcctctgcgctagcttccaaagcgacaggctacccgattgccaaa
cttgcagcgaaaatcgcagttggcttaacacttgatgaagtgagaaatccagtaacagga
acaactttcgcccactttgaaccaacgctagattatgttgttgcgaaaatcccacgcttt
gctttcgacaaatttgagcaagcggatcgtcgccttggaacacaaatgaaagcaactggt
gaagtcatggcaattggccgttcatgggaagaagcacttctaaaagcagttcgctcccta
gaaattggtgctgaccatttgttgcttgaagaagcggaaaatgctgacgaagcaacatta
gaacgcaagatttgcttcccagaagatgatcgtttattcttcctagcagcagctttgcgc
cgtggtcaaacaatcgaacaactccacgagaaaactaaaatagatttattcttcttatat
aaattaagtaaaacaatcgaacttgaaaatcgtatcaaagaaaatccgcaaaaccaagaa
attttggcagaagcgaaacaggcaggtttttctgacgctttccttgcaacttgttggaat
gttgatgaacaagcgatttatgacttaagaaaagcgcaaaatcttttcccggtttacaaa
atggttgatacatgtgccgcagaatttgaatcgacaacaccctatttttacagcacatat
gaagaggaaaatgagtctacacgatcagcgaaagaaagcgtgattgtactcggatctgga
ccgattcggattgggcaaggggtggaatttgactatgcgacagtgcattcagtgtgggcc
attcaacaagcgggctatgaagcaattatcattaataataatccagaaacagtttcgact
gactttagtatctcggacaaactttactttgagcctttgacattagaggatgtaatgcac
gtcattgaaatcgaacaaccattaggagttgtcgtgcaatttggcggacaaacagcgatt
aatttagcagacggtctagcaaagcgtggcgtgaaaattctaggtacaagtttagaagat
accgaccgcgcggaaaaccgtgatgcctttgaaaaagcgctagaaatcttacaaatccca
caaccagctggtaaaacagctacatcggtagaagaagcaattacagtagcgacagacatt
ggctatccggttctagtacgtccatcttacgtacttggcggccgtgcaatggaaattgtg
gaatcagaagaggcgttaaaacattatatgacaaatgcggtaaaagtaaatccaaaacac
ccagttttagtagaccgttacgtaagtgggcaagaagtagaagtggacgcaatcagtgat
ggtgtaaacgtcttaattccaggaattatggagcacatcgaacgtgctggcgtccattca
ggagactcgattgcggtttatccagcgcaacgtttaagcattcaagtgaaaaacacgatt
gtcgattatacaacgagattagcaactggattaaacatcatcgggatgctaaacattcaa
tatgtcgtggacggcgaagaagtttttgttattgaagtaaatccgcgttcaagccggacg
gcgccatttttaagtaaaataacggaaattccgatggcgaatgtggcgacaagagtgatt
ttaggagagaatttaatcgaccttggttacacgccagggcttgccccagaaaaacaagaa
atttttgttaaagtgccagtgttctctttcgcgaaattgcgtagtgttgatacatcgcta
ggacctgaaatgaaatcaactggtgaagttatgggtaaagatgtgacacttgaaaaagca
ctctataaaggttttgttgcgagcgggacaacgatgcatgactatggaaccgtactttta
actgtagctgaccgcgataaagaagaagcagtagaactagcgaagcgatttaatcgcata
ggctttaccatcatggcaaccaaaggaacggcaagcacattagaagaagcaagcattcca
gtgtcacaagtgaaaaaaattggtgagaatcaagaaacgttaattgattacatccgaaat
ggacaagttacgctcgtagtaaacaccttaacaacaggtaaacgtccagaacgtgatggc
ttccaaattcgtcgcgaatctgtcgaaaatggcattccagtttgtacatcacttgataca
gcagaagcaatcttacgtgtacttgaatcacgctcttttgaactcgaatcgatgaatgcc
agcgaagtaaaacaaccgaaatcacgtgtataa
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