Listeria monocytogenes 08-5923 (serotype 1/2a): LM5923_2171
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Entry
LM5923_2171 CDS
T01164
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lmy
Listeria monocytogenes 08-5923 (serotype 1/2a)
Pathway
lmy00300
Lysine biosynthesis
lmy00470
D-Amino acid metabolism
lmy01100
Metabolic pathways
lmy01110
Biosynthesis of secondary metabolites
lmy01120
Microbial metabolism in diverse environments
lmy01230
Biosynthesis of amino acids
Module
lmy_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lmy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LM5923_2171 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LM5923_2171 (dapF)
Enzymes [BR:
lmy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LM5923_2171 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ADB72012
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All DBs
Position
complement(2181260..2182249)
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AA seq
329 aa
AA seq
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MATIHFTKVHGSQNDFFLVDEEGNQIMDWSDAKRADFAIKLCDREHSLGGADGILYVTKS
SEAGPIGQMRVVNSDGSIASMCGNGLRTVARYLLEKHALTEAKVETMKAILDVKKATSLG
FDIPTYQVEISPVKFNAESLPMNVGVEKLFNQVVPELDAELAFSAVSVPNPHLITFVDQT
VLDSDRQETLASYLNSENPYFPDGVNVSFVKRLSDDAIYVRTFERGVGFTNACGTAMSAC
SLIKKMLDKDTFETPLNVYNDGGRVQVTAKKDEAGDISLQLIGNATFVSTGSVSYESDTV
TELTNEATPEQAQYQELVKEVKEFLKTTE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaattcactttacaaaagtacatggttcgcaaaatgattttttcttagttgat
gaagagggaaatcaaataatggattggtcggatgcgaaacgtgctgattttgcaataaag
ctttgtgatagagaacattcgcttggtggagcagacggaattttatatgtcacaaaaagc
agtgaagctggaccaattggccaaatgcgtgtcgttaactcggatggatcgattgcgtcg
atgtgcgggaatggcctaagaacggtagctcgttatttacttgaaaagcacgcattaaca
gaagcaaaagtcgaaacaatgaaagcgatactggatgtcaaaaaagcgacttcgcttggt
tttgatattccaacgtaccaagtcgaaatttctccagttaaatttaacgcagaaagttta
ccaatgaatgtcggtgtggaaaaattatttaatcaagttgttccagaacttgatgcagaa
ctcgctttttctgctgtttctgttcctaatccgcatttgattacatttgtggaccaaacc
gtgttagactcggatagacaagaaactttagcgagttatttaaacagcgaaaatccttat
tttccagatggtgtcaatgttagttttgtgaaacgattaagcgatgatgcgatttatgtg
cggacatttgaacgcggtgtaggttttacgaatgcatgcgggacagcgatgtcagcttgt
agtttaattaaaaaaatgttagataaggatacttttgaaacaccacttaatgtttataat
gatggtgggcgagtacaagtgactgccaaaaaagacgaagctggtgatatttcgctacaa
ttaattggtaatgcaacgtttgttagcacggggtcagttagctacgaaagcgacacagtt
actgagcttacaaatgaagcgacaccagaacaagcacagtatcaagagcttgtaaaagaa
gtaaaagaatttctaaaaacaaccgaatga
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