Listeria monocytogenes 08-5923 (serotype 1/2a): LM5923_2421
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Entry
LM5923_2421 CDS
T01164
Symbol
addB
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lmy
Listeria monocytogenes 08-5923 (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmy03400
]
LM5923_2421 (addB)
Enzymes [BR:
lmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LM5923_2421 (addB)
DNA repair and recombination proteins [BR:
lmy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LM5923_2421 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ADB72262
LinkDB
All DBs
Position
complement(2440208..2443699)
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AA seq
1163 aa
AA seq
DB search
MFGGGGMTLQIIAGRSGTGKTTHLMDEVGEKIKQNSKTYIFIVPDQMTFQMETSFLNKEN
LAGMLGTQIFSFSRLAWKILQETGGLSKTFLSQTGIEMVIRKAALDQKDKLKIFSRATSR
KGFYSELANLFKEMKQEEVSIEDMVKSATNLSTSVNNKVHDISLIYQKYEELLADKFLEN
EDYLRLLAEKIADSDYLNQTEIVIDGFTSFSKQELTVIGELMRKCDKVTISLTLNVPEIQ
HGLDEYSMFKASTEAYYALLELAKLNGTQVEENKFFLENKRAKTESLAFLANTWGHNKFM
SFKNEPQNLKIHQANNRRAEIEGIAREIRQLALNGYRYRDIAILTRNLGDYDVLCETVME
AYNIPTFIDKKRAMAKHPFIEFIRSSLDAILFNWKYEPIFQAVKTEFFFDITEKSSLNRR
KADILENYVLENGIQNKWKWEKEGDWIYRKIRGLSTNVLPQTDEEIHMQSIINEMRNLIV
NPLSTLELNLRKAKTGMEFALALYHYLEQVNAVERLESWRQRAEEQGYLELAREHEQAWS
SISALLDEFVEVLGEETLDLDSFTEIIGTGLDALEFSLLPPSLDQVVLSDMENAKLLDMK
VIFAIGMNDGVMPLRQKDKGIFSDQDRDALRAEDSKLKPSAKNNIGEEDLLAYKIISLPS
DKLFLSYPAADEEGKVLSESNYLRKIKGQFNELNESVYLTDPSLLSDAEQSSYIRSKQAT
LGLLTSQLQMYKRGYTLSSVWWDAYNSYFENEKESIMAKQVLSSLYYENKTKPLQETTAK
NLFGETIHASVSRMEKFFSCEFQHYAQYGLKLEERGHFQLQAVDMGEIFHGAMEWISAEL
KRNNLDWGNLKEEECKQMAKLAMTFLAPKIQHEILLSSKRMEYIQYKLLQIITRATTVLN
EQAKSSAFRPVGLEVDFGLKGDIPPLKIPLQSDSELLLQGRIDRIDMAEQDDRTFLRIID
YKSSSHDLALTEVYYGLALQMLTYLDIVVTNAQKMIGKTAEPAGVLYFHMHNQYVQAEKE
LSDEAIAKELQKSSKMKGLILSDPVAVSLMDTTLEKGKASTIIPAEIKQNGELSARSRTA
TRAEFDKMRQFVRHKYQEAGNKILDGAVSINPYKLKERTPCQFCSFRSFCGFDPSLTSNQ
YRHLANEKAETILTKMDIEGGTQ
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtggtgggggtatgacacttcaaataattgcaggtagatcaggcacaggcaaa
acaactcatttaatggatgaggttggagagaaaattaaacaaaattctaaaacgtatatc
tttattgtcccagatcaaatgacgtttcagatggagacaagctttttaaataaggaaaat
ttagcaggtatgcttgggacacaaatatttagttttagccgtttagcgtggaaaattctt
caagaaacaggtggattatctaaaactttcttaagtcagacaggtatagaaatggttatc
agaaaagcagcccttgatcaaaaagataaattaaaaatcttttcaagagctacttctaga
aagggtttttattcagagttagcgaatttatttaaagaaatgaaacaagaagaggtttcc
attgaagacatggtcaagagcgctacgaatctgtctacaagtgtgaataataaagtgcat
gatatctcgctaatctatcaaaagtatgaggaattattagcggataaattccttgaaaat
gaagactatttgagattgcttgcagaaaaaattgccgatagtgattatttaaatcagact
gaaatagtcattgatggttttacttctttctcaaaacaagagctgacagtcattggggaa
ttaatgcggaaatgtgataaagtaacgatttctttgacgcttaatgttcctgaaattcag
catggactagatgaatacagtatgttcaaagcaagtacagaagcgtattatgctctatta
gagttggctaaattaaatggcactcaagtcgaggaaaacaagttcttcttagagaataag
cgagcaaaaacagaatcactagcctttttagctaatacttgggggcataacaaatttatg
tctttcaaaaacgaacctcaaaatttaaaaatccatcaagcgaataacagacgtgcagaa
atagaagggattgctcgtgagattcgtcaactagcattaaatggatatagataccgcgac
atagctattttgacaagaaatcttggagattatgacgttttatgtgaaacggtgatggaa
gcatataacattcctacctttattgataaaaagagagctatggctaaacacccttttatc
gagtttattcgttctagcttagatgctattctatttaactggaagtacgaaccaatcttt
caagcagttaagacagagtttttctttgatattaccgaaaaatcaagccttaacagacgt
aaagcagatattcttgaaaactatgtattagaaaatggtattcaaaataaatggaaatgg
gaaaaagaaggagattggatttaccggaaaatccgcggactatccaccaatgtattgcct
caaacagatgaggagattcatatgcaatctatcattaatgagatgaggaatcttatagtg
aatccactttctactttagaattaaatctaaggaaggcaaaaacagggatggagtttgct
ttagctctttatcattatttggagcaagtaaatgctgtagaacgattggagtcatggaga
caaagagcagaagagcaaggctatttagaacttgcacgagaacatgaacaagcatggagc
tccatttccgcacttttggatgaatttgtagaagttttaggagaggaaacgttagatcta
gacagttttactgaaattattggaacgggtcttgatgcacttgaattttcgcttttgcca
ccttccttagaccaagtagttttatctgatatggagaatgcgaaattgctagatatgaaa
gtgatttttgctattgggatgaatgacggtgttatgccgctacgtcaaaaggataaaggg
attttttcggatcaggatagagatgcattgcgtgctgaagacagtaaattgaaaccatct
gctaaaaataatattggtgaagaagacttattagcatataaaataataagtctccctagt
gacaaattatttcttagttatcctgccgctgatgaagaaggaaaagtattaagcgaatcc
aattatttaaggaaaataaaaggacagtttaatgaactaaatgaatcagtttatttaaca
gacccgagcttattaagtgatgctgaacaaagtagttacattcgctctaagcaagcaaca
ttaggattgttgacaagtcaattacaaatgtataaacgaggttacacgctgtctagtgta
tggtgggatgcctacaatagttattttgaaaatgaaaaagaatcaataatggctaagcaa
gtgctatcgagtctatattatgaaaataaaacaaaaccattacaagaaacaactgctaaa
aacttatttggagaaactattcatgcaagtgtttcaagaatggagaaatttttcagttgt
gagttccaacattatgctcaatatggcttgaaattagaagagcgagggcattttcagttg
caagccgttgatatgggagagattttccatggagcaatggaatggatctcagcagaatta
aaaagaaataatctggattggggtaatttaaaagaagaagaatgtaagcaaatggcgaaa
cttgcaatgacattcctagctcctaaaatccagcatgaaattttgcttagctctaaaaga
atggaatatattcagtataaattactccaaatcataacgagggcaacaactgttttaaat
gaacaagcaaaaagcagtgcgtttcgtcctgttgggttagaagttgattttggtttgaaa
ggagatattccgccattaaaaatacctcttcaatcagatagcgaacttcttttgcagggg
cgaattgatagaattgatatggcagaacaagatgatcgaacgttcctacgcattatagat
tataaatcaagttcgcatgatttggcgctcacagaagtctattatggtttagcgcttcaa
atgcttacctacctggatattgtagtaacaaatgcacaaaaaatgattggcaaaactgcc
gaaccagctggggtgctgtatttccatatgcacaatcaatatgtacaagcagagaaagag
ttaagtgatgaggctatcgcaaaagaattacaaaaaagctccaaaatgaagggattgatt
ttatccgatcccgtggctgtttcattaatggatacgacccttgaaaaaggaaaagcatct
actattattccggcagaaataaaacaaaatggagagttgagtgcgagatcaagaactgcg
acaagagcagaatttgataaaatgcgacaatttgtccgtcataaatatcaagaagctggg
aataaaatacttgatggagcagtttcaattaatccatataaactaaaagaaagaacgcct
tgtcaattttgcagtttccgttcattttgcggatttgatccatctttaacaagtaatcaa
tatagacatttagctaatgaaaaagcagaaacaattttaacaaaaatggatattgaagga
gggacgcagtag
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integrated database retrieval system
