Listeria monocytogenes serotype 7 SLCC2482: LMOSLCC2482_0161
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Entry
LMOSLCC2482_0161 CDS
T02221
Name
(GenBank) DNA repair helicase family protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lmz
Listeria monocytogenes serotype 7 SLCC2482
Pathway
lmz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LMOSLCC2482_0161
09124 Replication and repair
03420 Nucleotide excision repair
LMOSLCC2482_0161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmz03021
]
LMOSLCC2482_0161
03036 Chromosome and associated proteins [BR:
lmz03036
]
LMOSLCC2482_0161
03400 DNA repair and recombination proteins [BR:
lmz03400
]
LMOSLCC2482_0161
Enzymes [BR:
lmz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LMOSLCC2482_0161
Transcription machinery [BR:
lmz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LMOSLCC2482_0161
Chromosome and associated proteins [BR:
lmz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LMOSLCC2482_0161
DNA repair and recombination proteins [BR:
lmz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LMOSLCC2482_0161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
CBY02682
LinkDB
All DBs
Position
157330..159669
Genome browser
AA seq
779 aa
AA seq
DB search
MRRVRISVRRLVEFVRRSGSIDNRMTNSDRALEETKIHQLLQKEAGEEYAAEVRLNLERI
VDGIAFSLDGRADGIINSRMIDEIKTTETPMDEITEDFRPLHWAQLICYGFMLAEKSDLA
EVTLQLTYYQVVDKEVKQFQRVMSREELSVFVDDLLSQYAIWAKASAAWEMKRNKTIQEL
TFPYDNYRSGQRELAIAVYRTISSEESLFCEAPTGIGKTMSTLFPGIKAMGEGKTDKLFY
FTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDERKCEPDHCQFARGYYDRLN
EALFDMLQSEEAITRQVVEGYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRF
FAEGPGKYTFLVDEVHNLVDRARSMYSATLKKSTVMQVKRGLDSKKNKRLLNAINVMNKE
MIVLNKKLKDLEKTTYVQKSELVDWNAAVLKFTFVAKEWLPQNTQSELQVDVLDLYFESL
RYTAIAEFYDERYVTQVTRNHRDLEIKQLCLDPAFLLSERLKLGSSSVLFSATLRPIDYY
TNVLGGQEDTSRMIFSSPFKQKNMHLLVADYISTKYQMRENSMEAVVDALYALVSGKNGN
YIFFFPSFLYLQKVYDLFKEKYPNIRLQKQETAMDEKQREHFLEDFHAENVETLIGFCVL
GGVFSEGVDLRGNRLVGAAVVGVGLAQLNHESDLIKDYYNETIGRGFDYAYQIPGMNKVL
QAVGRVIRGESDRGVVLLIEERFSADRYRALFPTHWNHAKTVKSTDDISREVAGFWRNS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaggagagtgcgtatttcagttaggcgtttagtagagtttgtgcggagaagcggtagt
attgataaccggatgacaaattcagaccgcgccttagaagaaacaaaaattcatcaatta
ctccaaaaagaagctggggaagaatatgccgcagaagtacggctaaacctagaacgaata
gtggacggaattgctttttcgcttgatggacgcgcagatggcatcataaatagtcggatg
attgatgaaattaaaacaacagagacgccaatggatgaaattaccgaagattttcgacct
cttcactgggcgcaacttatttgttatggatttatgcttgcagaaaagtccgatttggca
gaagttactctgcaattaacgtattatcaagtagttgacaaagaagtaaaacaatttcaa
cgtgtaatgagtcgcgaggaactgagtgtttttgtggacgatttactttcccaatatgct
atttgggcaaaggcatctgccgcttgggaaatgaaacgaaataaaacaattcaagaatta
acgtttccatacgacaactatcgaagtgggcaaagagagctcgccattgcggtgtaccga
acaatatcttcagaagaaagtttgttttgtgaagcacccacaggtatcggcaaaacaatg
tcgaccttgtttcccggtattaaagctatgggtgaagggaaaacggataaattattttac
tttactgcaaaaacaatcacgcgacaagttgccgaagatgcactagatgagatgcgtcgt
aaaggactggctgcaaggagtgttacaataactgcgaaggataagatatgttttttagac
gagcggaaatgtgaaccagatcattgccaatttgcgcgtggttattatgatcgtttgaac
gaagcgttgtttgatatgttgcaatccgaagaagcgattacccgtcaagttgttgagggt
tatgcccggaaatacacactttgtccatttgaattatcgctggatgtggctcttttttgt
gatgtaatagtttgtgattataattatttattcgacccagtagtttacttaaaacgcttt
tttgcagaaggaccgggaaaatatacttttcttgtagatgaagtgcataatttagtagac
cgtgcgcgctcgatgtattcggcgacattaaaaaaatcaacagttatgcaagtcaaacgg
ggactagattcaaaaaagaacaaacgattgctaaatgcaataaatgtgatgaataaagaa
atgattgtgcttaacaaaaaactaaaggacttagaaaaaacgacttatgtccaaaaaagt
gaactcgttgattggaatgcagctgtgttaaaattcacctttgtagcgaaggaatggttg
ccgcaaaatactcagtcagaattacaagtggatgtgttggacctttattttgaaagttta
agatatactgccattgcggagttttatgatgagcgttacgtcacacaagttacgagaaat
cacagggatttagaaataaaacaactatgtttggatccggcgttcttattatcagagagg
ctaaaactcggaagcagttcggtgcttttttcagcaacgcttcgaccaatagattactat
acaaatgtacttggtggtcaagaagacactagtagaatgatcttttcttcgccatttaaa
caaaaaaacatgcatttactagtagcggattatattagtacgaaataccaaatgcgtgaa
aatagtatggaagctgtcgtagatgctctctatgctctcgtctctgggaaaaacggcaac
tatatatttttctttccatcatttctatatttacaaaaggtatatgatttatttaaagaa
aaatatcctaacatcaggttgcaaaaacaagagactgctatggatgaaaagcagcgagag
cattttttagaagattttcatgcagagaatgtagaaaccttgattggcttttgcgtttta
ggaggcgttttttcagaaggggtagatcttcgcgggaaccgattagtcggtgcggctgtc
gttggtgtaggacttgcgcaattgaatcacgaatctgatttaattaaagattattataat
gaaacgattggtcggggatttgattatgcatatcagataccaggaatgaataaggtgctt
caagcagttggccgggttattcgaggagaatcagatcgtggcgtagtgttgttaatagaa
gaacgattttctgccgatcgttaccgagcgttgttccctacgcactggaatcatgcgaaa
acagtgaagagcacagacgatatctcccgagaagtggccggattttggcggaatagctaa
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