Listeria monocytogenes serotype 7 SLCC2482: LMOSLCC2482_1489
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Entry
LMOSLCC2482_1489 CDS
T02221
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lmz
Listeria monocytogenes serotype 7 SLCC2482
Pathway
lmz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMOSLCC2482_1489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmz03019
]
LMOSLCC2482_1489
Messenger RNA biogenesis [BR:
lmz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LMOSLCC2482_1489
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
CBY04010
LinkDB
All DBs
Position
complement(1483781..1485448)
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AA seq
555 aa
AA seq
DB search
MTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYL
EENKDRVKAVFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFH
VVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLS
HIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQ
QVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETG
NLGEPIQSLQLMTKGNHPQFNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLTMS
NNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGE
ILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTI
TSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFE
QTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgacaataaaaaaagcgaaaaacataaaaatcattccactcggcggtgtcgatgaaagt
ggcaaaaatttatatgtagtagaaatagacgaagatatctttatattagatgcgggctta
atgttcccagaaaatgaattactaggaattgatattgttattccagatttcaaatattta
gaagaaaataaagatcgtgtaaaagctgttttcctaacacacggtcacgaagatgcaatt
ggagcattgccatacttgcttcaaaaaatcaaagcaccagtttacggtacagaattaacg
atagcactggcaaaatcagcacttaaagaacaccgtaaactacgcttcaagaatttccat
gtcgttaacgaagaaacaactttatccttttcaaaaattgatgtttcctttttccgtaca
acgcacactattcctgattctgttgggattgttcttgaaacaagcgaaggatctattgtt
tatacaggggatttcaaattcgatcaatcagcgaaggacggctatgcttctgatttaagc
cacattgcagaatttggcgaaaaaggggtactagctttactttcagatagttcagaggct
gagcaccctggaacaacgtctagcgatagtttaattgaagaagagatcagacatgctttt
agaatggcagatggcagaattatcgttgcttgtgtagcttctaatttaattcgcttacaa
caagtactcgatgcatccgttgcaaccaaacgtaaagtcgctattgttggtaaagaatta
gagcgcgttttcgaaattgctggcagtttaggtaaaatcgtcattgaagaagacttaatt
gttccgttaaaagaacttaaaaaatatagcgatgacgaaattactattattgaaacaggt
aatctaggagaaccaattcaatcattacaattaatgactaaaggaaatcatccacaattc
aacatcaaacctggtgatactgtttacattacgacgacgccatcaccatctcttgaaaca
atgatggctaaaacaatggatatgctctataaagcaggcgcgaaagtgctcactatgagt
aacaatctattcatctctggccatgcaagccaagaagatttaaaattaatgattaactta
ttaaaaccaagatattttgttccagttcacggagaatatcgcatgttaatcagtcacgct
aaattagctcatgaagttggtatggcaaaatcagaagtatttatcgtaggtaaaggtgaa
attttagaatataaaaatgataaaatgacagctggtaatcgcgtatactctggtaatact
ttaattgatggtttaggtgttggtgatgttggtaacatcgtgctacgcgaccgtaaattg
ctctcagaagacgggattttcattgttgtagtaacacttaatcgtaaatcaaaaaccatt
acttcaggaccagaaatcatttcacgtggctttatttatgtgagagaatcagaacatttg
attgaagaatcttccaaagttgttacaaaaattgttgaaaaaaatcttcaagaaaccggc
tttgaatgggcgaaattaaaacaagacattcgtgaccaattaaatcgctacttatttgaa
caaacaaaacgacgtccaatgattttaccaattattatggaagtctag
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