Listeria monocytogenes serotype 7 SLCC2482: LMOSLCC2482_1706
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Entry
LMOSLCC2482_1706 CDS
T02221
Symbol
sbcC
Name
(GenBank) exonuclease, SbcC family
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lmz
Listeria monocytogenes serotype 7 SLCC2482
Brite
KEGG Orthology (KO) [BR:
lmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmz03400
]
LMOSLCC2482_1706 (sbcC)
DNA repair and recombination proteins [BR:
lmz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMOSLCC2482_1706 (sbcC)
Archaeal homologous recombinant proteins
LMOSLCC2482_1706 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
ABC_tran
adh_short_C2
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CBY04227
LinkDB
All DBs
Position
complement(1710142..1713213)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKEITEVTLAFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
IGDEMKLLASSVRDVNAKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEVILQRLA
HTAYYEKVENLLWEKQKQAEILVVEARKKVAELAELSLPDGEVSGKTTSEISVLQNEAIQ
KEQAILTELENKLSIIRKQTSEAVEKVTLAKEQLLDWQNLDKYTEEVATLEAEKDFYQTM
EVRMEAAKRASNLQSQDALCIRLKEQLETAEQTEKQVALEAEQVKAQFSHAKKQKEALAE
KEAELEINKRTLFQLEEMEPKILELETVLIQKRRAELDWKKTTTLLEKIIDKEQKIATEL
QSVEARLAEINKAELMYLEVINKRTTLEARIEKEQELVNKRIKMEEWDAAKQTEEQTLAQ
LLIEKAEMERTIKQEETKLEKEQAATIAAHLHEGDACPVCGSQSHPVLAKFGETADLETL
EIAKAKLQEKQLVITTTEKAISQLEWQLNEWADMKEQSLAEIQQTLAENIQLATNLREQI
TQLQSEVAQKETVQATLESLKNRQNETLTEKNKMALEVEKLHQQVQLTEGKRTYLEQSIP
DELRDKAVFDNKMKELSSKIETHIKQAEQIDALFRQAEKETTRLESTLHSAQKTTVDAKE
ALQVQREIFKEAMKQNDFLSYDAYKQALLSVEELKNLEEKLAEYERKRHLAVSRQADLKE
KLQNKQKPNMEQLEFIMKEKQLELSQSEENTMKQREFVAKRKELVENYQNSIQAVEQAEE
NYADIGLLADAARGKNARRLTFERYILAMFLDTIIHRANHRLSKMTSGRFELQRKMEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFID
EGFGTLDPESLEAAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFIT
ASS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgattaaattaacgatgcaagcttttggagcctatgccaaaaaagaagtcatc
gattttgaaaagcttggaacggagcaaatttttgtgatttctggtaaaacaggagctggg
aaatcgacaatttttgatgcgattagttttgcaatttttgggaaagcgaacacatttgat
agggaaagtttttcgatgcgaagtcattttgcgacggataaagaaataacggaagtaacg
ctagcttttagattgaaggacaagatttaccaaattagccgcattcctcagcaggaaatt
gccaaacaacgcggaaacggaacaaccacttcgccgcaaaaagcagaattatatgagttg
attggtgacgaaatgaagttgcttgcaagttccgtgcgcgatgttaatgcaaaaatggaa
gaattaattcaacttaatgtggatcagtttagacaaattttgatgattcctcaaggcgaa
tttagagaactgctcgtatcggatagtaaagaaaaagaagtcatattgcaacggttagcg
catactgcttactatgaaaaagtggaaaatttgttatgggaaaagcagaaacaagccgaa
atcttggttgtagaagcgcgtaaaaaagtagcggaacttgctgaacttagtttaccggat
ggggaagtttctggaaagacaacgagtgaaatcagcgtgttgcaaaacgaggccattcaa
aaagaacaagcaattttaacggaattagaaaataaattaagtattattcggaaacaaaca
agtgaagctgtcgaaaaagtgacgcttgcgaaagaacaactgcttgattggcaaaatttg
gataagtatacagaagaagttgcgacactagaagcggagaaagatttttatcaaacaatg
gaagttcgcatggaggctgcgaaaagagcaagcaaccttcaatcccaagatgcactttgt
attcgtttaaaagaacaattagaaacagccgaacaaacagaaaaacaagtagcacttgag
gcagaacaggtaaaagcccaattttcacatgcgaaaaaacaaaaagaagctcttgctgaa
aaagaagcagaattagaaataaacaaacgaacacttttccaattagaagaaatggaaccg
aaaatattggaattagaaacagtcttgatccaaaaaagacgcgccgaattagactggaaa
aaaacaacgacccttttagaaaaaataatcgacaaggaacaaaaaatagccacagaactg
caatcagttgaggcgcgattagcggaaataaacaaagccgagctcatgtatttagaagtt
attaacaaacgaacaacattagaagccaggatagagaaagaacaagaattggttaataaa
cggataaaaatggaggagtgggatgcagccaaacaaactgaagaacaaacattagcacaa
cttttaatagaaaaagcggaaatggaaagaacgattaaacaggaagaaacaaaactagaa
aaagaacaagcggcgacaatcgcagcgcatttgcatgaaggagatgcttgtcctgtctgt
ggttcacagtcacacccagtactcgcaaaatttggagaaacagctgaccttgaaacactc
gaaatagcaaaagcaaagctacaagaaaaacaattagtgattactacgacggaaaaagct
atcagtcaactcgaatggcaacttaatgaatgggcagatatgaaagagcaaagtttagcc
gaaatacaacaaacattagctgaaaatatccaactagctactaatctgagagagcaaata
acccagttgcaatccgaagtagctcaaaaagaaactgtccaagcgacattagaatcattg
aaaaacagacaaaatgaaacgctaaccgaaaaaaataagatggctctcgaagtagaaaag
ttgcatcaacaagtgcaactaacggaagggaaacgaacttatttggaacaatccattccc
gacgagttgcgagataaggctgttttcgataacaaaatgaaagaactaagctcaaaaatc
gaaacacatatcaaacaagccgaacagattgatgcgttgtttagacaggcagaaaaagaa
acaaccagactagaatccacgttacattcagcgcaaaaaacaacggtggatgcgaaagaa
gccttacaagtacagcgcgaaattttcaaagaagccatgaaacaaaatgattttttatcc
tatgatgcgtataaacaagctttgttatcagtagaagaactaaaaaacttagaagaaaaa
ctggccgaatacgagcgaaaacgccatttagctgtatcacgccaagctgatttaaaagaa
aaactccaaaacaaacaaaaaccaaatatggaacaactagaattcattatgaaagaaaaa
caactcgaacttagccaatcggaagaaaatacaatgaaacaacgcgaattcgttgcaaaa
agaaaagaacttgtcgaaaactaccaaaacagtattcaggcagtggaacaagccgaagaa
aattatgcggatattggcttactagctgatgcagcgcgtggtaaaaatgcccggagatta
acgtttgaacgatatattttagcgatgtttttagacacgattattcaccgcgccaaccac
cgtttatccaaaatgacaagcggtcgttttgaactccagcggaaaatggaaaaagcaaaa
ggaaatgtccaaagtggcttagaacttgaagtttttgatgagtatacaggattaactcga
catgtaaaaacactttcgggaggagaaagcttcaaaacctctttagcgcttgcattatca
ctcgcagaagtcgttcaagaaatggcaggtgggatttcacttgaaacgatgtttattgat
gaaggattcggtacgcttgatcctgaatcacttgaagccgctgtagaatgcttactggaa
acacaagaaaatggccgcttagttgggattatttcccatgtaccagaactaaaagaacga
atttccgcaaggctagaagtaaccgcaacaaatcacggaagtaccactaaatttattact
gcaagtagctaa
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