Levilactobacillus namurensis: RIN67_00810
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Entry
RIN67_00810 CDS
T09877
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lna
Levilactobacillus namurensis
Brite
KEGG Orthology (KO) [BR:
lna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lna03400
]
RIN67_00810
Enzymes [BR:
lna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RIN67_00810
DNA repair and recombination proteins [BR:
lna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RIN67_00810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
HEPN_AbiU2
Motif
Other DBs
NCBI-ProteinID:
WNN65665
LinkDB
All DBs
Position
179355..183002
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AA seq
1215 aa
AA seq
DB search
MSLQFILGSAGMDHRKPMVTALAQQLAEQPEEQGYYLVPNHIKFETEVDVLTDLKRELAQ
DDPLFAQSQVQVFSFTRLAWFFMKNEPIYQLPRISPAGLNMLIYQIIQSHADQLTIFRGE
VTRPGFISQLTAQLAEFRVGQVTAADLATAIDRLAPGSADLQAKLHDLLIIYEAFETQMA
GKYVANTDLLNQLADFLTQVDLSHAHFYLEGFSQLSAQERQLVTVLIQRAASVTVALNLD
KAAPQELPDPTNLFFQSAKLYQQLYAGARANQVPILTDQRAQKPRVSADLLALDQYWQAS
TNLSAQLPAVTTTPQQIQVVQAASRYAEVAHVATRIRQLVASGQYRYRDFLVTTRHLDAY
QTVIAPIFNAQAIPYFDDADVQMADHPFVELLTALFDVQRRDYRYADVFRVLKSELLLPV
DENGDPMALDAYRQAVALTENWVLKNGYQGQHRWTQKDDWVYTRFAAGDDSVQTTQDDQI
TAQINQIRHFIKQTLPPFFTQLKHAQTYTDAAAILYQFLANHGVTQRLMAWRDQAIDAGE
LMQAGQPEQTWTTFCQMLDECHAILGPLPFNLTDFEALLQAGFAGAKFNQIPSTLDQVSV
SESGLVQANNRKVTFLIGATADTMPDNQVPATLLADNDRQDLGEELQATDSQAYLRDDAA
TQLAGEPYLNYLAFLSGSEQLIFSYPAASDQSDGVELSPYVARIQEHFHLPTQVVTATPA
ADDHDIWNYIGTRRTTLRHLVQASHDSKERNQSLSPAWSYILTLLQQDPNYGELTNKLLG
SLSYRNVPQKLRPDIVTQLYGRKISTSISKLEEYYANPYAYFLKYGLRLQERDVFELSPA
STGEFFHATLDGLIKLVNQQHLNLADLDDQQMNDMIDEVTAKVLDTTLNPQFAILESSAR
MGYIRHQLIKTMHQMGRTLHEQSRRTALRPRRTEVQFGLGDQQGLQPLVFDLDADQPDSA
TPHRQVLVRGRIDRLDELKLAEKTFLGIVDYKSSEHQFDYQSAYYGQAMQMLTYLDAVKR
NLSQLVDQQEAPSTELAGAVYLHLQNPVLKAGDILNQDPLDALLKAEQYQGLLLDDTDFL
DHIEEWLATDRYSKLFRGLRKKVKGGYSSEKLVTPDELDNLLAHTERLIKTAALEILEGH
LDLAPVREQNRTALQFSPYKSIMQFDPLLPENNYHNLTSLKKADIMTLIEQERQQNAADE
MAAIKKRAEQGDHRE
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacaatttatcttaggcagtgccggaatggatcaccgcaagccgatggtcacg
gccctggcccagcagttggccgaacagccggaggaacaggggtattacctggttccgaac
catattaagtttgagacggaagtggatgtcctgactgatttgaaacgcgaattggcccag
gacgacccactctttgcgcagtcccaggttcaggtgttttcctttacccggttggcctgg
ttcttcatgaagaacgaaccgatttaccagctgccccggatctcgccggcggggctgaac
atgttgatctatcagattattcaaagccatgccgaccaactcacgattttccgcggggaa
gtcacccggccgggctttatcagccagttgaccgcccaactcgcggaatttcgggtgggg
caggtgaccgcagctgatttagccacggccatcgaccgcttggcccccggtagtgcggac
ctgcaggccaagctccacgatcttctgattatttatgaagcctttgagacccagatggcg
gggaagtacgtggccaacaccgacctcttgaaccagttggccgacttcttgacccaggtc
gatctcagccacgcccacttctacctggaaggcttctcccagttgagtgcgcaggaacgt
cagctggtgaccgtcttgattcaacgagcggccagcgtcacggtggctttgaatctagat
aaggcggctccgcaagagctgccagacccgaccaacttgttcttccaatcggctaaactt
tatcaacaactctatgccggagcccgcgccaatcaagtgcccatcttgacggatcaacgg
gcccagaaaccacgagtgtcggctgacctcttggcgttggaccagtattggcaggccagc
actaacctgagcgcccagcttccggcggtgaccaccacgccccagcagattcaggtggtt
caggccgccagtcggtatgctgaggtggcccacgttgcgacccggattcgccaactggtg
gctagtggccagtaccggtaccgtgattttctggtgaccacccgacacttggatgcgtat
cagaccgtgattgcgccgatctttaacgcccaggcgatcccttactttgacgacgcggac
gtgcagatggcggaccacccctttgtggaattactgacggccctgttcgacgttcagcgc
cgggattaccgctatgccgacgtattccgggtcctgaagtcggagctgttgttgccggtg
gatgaaaacggggaccccatggccctcgacgcttaccgccaagcggtcgctttgactgaa
aattgggtgctcaagaacggttaccaaggccaacaccgctggacccagaaggacgattgg
gtctacacgcgtttcgcggcgggggatgatagcgtccagaccacccaagacgaccagatc
accgcgcagatcaaccagattcgccacttcattaagcagacgttaccgccgttctttact
cagttgaagcacgcgcagacctatacggatgcggcggcgattctctaccagttcttggcc
aaccatggcgtgacccagcgcctgatggcttggcgggaccaggctattgatgcgggagaa
ctgatgcaggcgggccaaccggagcagacctggaccacgttctgtcagatgctcgacgag
tgccacgccattttgggaccactgccctttaacctaacggactttgaagcccttttgcag
gccgggtttgccggggccaagtttaaccagattccctcgacgctggaccaggtgtcggtc
tcggaaagcgggttagtacaggccaacaaccggaaggtgaccttcttgattggggcgacc
gccgacaccatgccggataatcaggtccccgcgaccttgttggcggataacgaccggcaa
gacttgggggaagagttgcaggcaacggatagccaggcttatctgcgtgatgatgcggcc
acccagttagcgggggaaccctacttgaactatctggcgttcttgagcggcagcgagcaa
ctcattttcagttatcccgcagccagcgatcagagtgacggcgtcgagttatcgccgtac
gttgcccggattcaggagcatttccacttgccgacgcaggtggtgactgcgacgccagcg
gccgacgaccacgacatctggaactatatcgggacccgccggaccaccttgcgccactta
gttcaagccagccacgatagtaaggaacgcaaccagtcgctgtcgccagcctggtcgtat
attttgacactcttgcagcaagacccgaattatggggagttaaccaataaattgttggga
agtttgagttaccgcaacgtcccgcaaaagctacgtccagatatcgtgacccagttatac
ggccggaagatcagcacgtcgatttcgaagctggaagagtactacgccaatccgtacgcc
tacttcttaaaatacggcctgcggttacaggaacgcgacgtcttcgaactgtctcccgcc
agcaccggggagttcttccacgcgacgctggacggcttgatcaagctggtcaatcagcaa
cacctgaacctggccgacttggacgaccagcagatgaacgacatgattgacgaggtgacc
gctaaagtcttggacaccaccctgaatccccagtttgcgattctggaaagttccgcccgg
atggggtacattcgccaccaattgatcaaaaccatgcaccagatgggccggacgctccac
gaacaaagccggcgaacggcattgcggccgcgtcggaccgaagtccagtttggtttggga
gaccagcagggccttcagccgctggtctttgacttagacgcggaccagccggatagcgct
acgccacaccggcaagtgctggtgcgggggcgaatcgaccggctagatgaattgaagttg
gcggagaagaccttcttgggtatcgttgattataagagctccgagcaccagttcgactat
cagagcgcctactacgggcaggccatgcagatgctgacctacctggatgcggtcaaacgc
aacctgtcccagctggtcgatcaacaggaggcgccgtccacggaactggcgggtgcggtg
tacctacacctgcagaacccggttcttaaggcgggggacattctgaatcaggatcccctg
gacgcgttgctgaaggcggaacagtatcaagggttactactcgacgacacggattttctg
gatcacatcgaagagtggctggcgactgaccggtactctaagctctttaggggcctgcgg
aagaaggtcaaggggggctattcatcagagaaactggtgacgcccgacgaattagacaac
ttgttggcccacacggaacggttgatcaagacggccgcactggaaatcttggagggtcat
ttggacctggcaccggtgcgggaacagaaccggacggcccttcagttctcaccctataag
tcgatcatgcagttcgacccactcctaccggaaaataattaccacaatttaaccagtctg
aagaaagccgacatcatgacgctgatcgaacaagaacgacaacagaacgccgcagatgag
atggcggctatcaagaagcgcgcggaacagggggatcatcgtgagtaa
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