Levilactobacillus namurensis: RIN67_03490
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Entry
RIN67_03490 CDS
T09877
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lna
Levilactobacillus namurensis
Pathway
lna03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RIN67_03490
09124 Replication and repair
03420 Nucleotide excision repair
RIN67_03490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lna03021
]
RIN67_03490
03036 Chromosome and associated proteins [BR:
lna03036
]
RIN67_03490
03400 DNA repair and recombination proteins [BR:
lna03400
]
RIN67_03490
Enzymes [BR:
lna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
RIN67_03490
Transcription machinery [BR:
lna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
RIN67_03490
Chromosome and associated proteins [BR:
lna03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
RIN67_03490
DNA repair and recombination proteins [BR:
lna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
RIN67_03490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD
DEAD_2
ResIII
PhoH
AAA_lid_4
HBB
BRCA2DBD_OB2
Motif
Other DBs
NCBI-ProteinID:
WNN66171
LinkDB
All DBs
Position
complement(762094..764457)
Genome browser
AA seq
787 aa
AA seq
DB search
MPIKLGVRELVEFTLRAGDLGATSNSQNTALLGAKIHRRLQKQRADDYQKEYYLDLPLTL
RDHEYLLHGRADGVTLGETTATIEEIKTSDGDFDQLPANKVILYWAQVKLYAHLLFHKFP
DLQTITLTLTYYQTSNDTTTQKNQTIDRQTAADFFQTVIDAYITWLKLRDDLRERRDPTI
QALTFPFDHYRPGQRELAVAVYKTILSQQHLFAEAPTGTGKTISTLFPAIKAIGEGVIQR
IFYLTAKQSTRRVAEDAIQLMATQGLQLKSITLTAKEKIQFPEETDLTPEENPYMLGYYD
RLRPALVDLIQHNDQLTRPVIETYARKHTLDPFEFQLDASLLCDVVIGDYNYLFDPQVHL
QRFFATSDPDNFFLIDEAHNLVARSREMYSAAIASQPLDHLLELSTGTPQVSRKLRQRIR
DLRQTFDDICAPLRSAGKTDSTFLSPPAEIDHELGRFIEATHDWLIDQPQTPFVKALLDV
YFAAISYQRIGEFYDETYRMRLTLADGNIVLKQLCLDPSAFLADSLDLGHGAVLFSATLS
PLSYYQTVLGGGETSLAYRLASPFPPQHQGLFITNYIQTTYKQRQANLAKILVAIKTLVD
AKTGNYLIFLPSYNYLLTVVAAFNLAYPHIHTVAQQATMSEADRTAFLAQFQPAPTTTLV
GFALLGGIFSEGIDLKGDRLIGVGIVSVGLPGINPETDLIRDYFDSHDQPGFAFAYQLPG
LNNVFQAAGRLIRGAHDVGVVLLMDQRFTAPRYTQLYPPHWQHYQRLYRSEQLGPALQHF
WNSEASH
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcaaacttggtgttcgtgaattagttgaattcaccctgcgcgccggtgacctc
ggtgccaccagcaatagtcaaaataccgcgctactgggcgctaagattcaccgacgactt
cagaagcaacgggccgatgactaccaaaaggaatactacctcgacctgccgttaacgctc
cgggaccacgagtacctgctccacggccgggccgatggcgtcacgttaggcgagaccacc
gcaacgatcgaagagatcaaaacctccgacggggacttcgaccaacttccggccaacaag
gtcatcctatactgggcccaagtcaagctgtacgcccacctcttatttcataaattcccc
gacctgcagaccatcacgttgaccctgacctactaccagaccagcaacgacaccacgact
caaaagaatcagaccatcgaccggcaaacggccgccgacttcttccaaacggtcatcgac
gcctacatcacctggctgaagctccgcgacgacctccgcgaacggcgcgaccccaccatt
caagcgctgacctttcccttcgaccattaccgccctggtcaacgagaactcgccgtcgcg
gtctacaagacgattctcagtcagcaacacctctttgccgaggcgccaacggggaccggc
aagaccatttccacgctcttccccgccatcaaagccatcggtgaaggcgtgattcagcgg
atcttctacctgaccgccaaacaaagcactcggcgtgtggccgaagatgccatccaacta
atggccacacaagggctgcagctgaagagtatcaccctcaccgccaaagagaagattcag
ttccccgaagaaaccgacctcacacccgaagagaatccctacatgctgggctactacgac
cgtctgcgtcccgcactggtcgacctgatccagcacaacgaccaactgacccggccagtt
atcgagacctatgcgcgtaagcacaccctcgatccctttgagttccagctggacgccagc
ctcctgtgtgacgtggtcatcggggactacaactacctgttcgatccccaagtccacctc
caacggttcttcgccaccagcgatcccgacaacttctttctcatcgacgaagcccacaac
ctagtcgcccgctcccgggagatgtactccgccgccatcgccagccagcccctagaccac
ctgctcgagctcagtaccggaaccccacaggtcagccggaagctccgccagcggattcgt
gacctgcgtcagaccttcgatgacatctgtgcgccgttacggtcggcggggaagaccgac
agtacgtttctctctccccctgcggaaatcgatcacgagttggggcgcttcatcgaagcc
acccacgattggctgatcgaccaaccccagacgcccttcgtcaaggccctcctggacgtt
tactttgcggccatcagctaccaacgaatcggcgaattctacgatgagacctaccgcatg
cggttgaccttagcggacggcaacatcgtcctcaagcagctctgcttagaccccagtgcc
tttctcgcagacagcctcgacctgggtcacggtgccgttctcttctccgcgaccctttcc
cccctaagctattatcagaccgttttgggcggaggcgagaccagcttggcttaccgactg
gcctccccctttccgccccagcaccagggcctattcatcaccaactacatccagaccacc
tacaagcaacgccaagccaacctggcgaagatcctggtcgccatcaagaccctggtcgac
gctaaaacgggcaactacctgattttcttgccctcctacaactacctgttgaccgtggtc
gccgcctttaacctggcctacccccacatccacaccgtggcgcaacaagcgaccatgagc
gaagccgaccgaaccgccttcctcgcccaatttcaaccggcccccaccacaacgctagtg
ggctttgcgttactgggtggtatcttctcggaaggcatcgacctcaaaggcgaccgactc
atcggcgtaggcatcgtcagcgtcggactccccgggatcaatccagagaccgacctgatt
cgcgactacttcgacagtcacgaccagcccggcttcgcgtttgcttaccagttgcccggc
ctcaacaacgtctttcaggcggccggccggctgattcggggagcccatgacgtaggcgtg
gttttattgatggatcaacgcttcaccgctccccgctacacccagctctaccccccacac
tggcagcactatcaacgactctaccggtccgaacaattgggaccagccctgcagcatttt
tggaattcggaggcgtcacattga
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