Levilactobacillus namurensis: RIN67_04010
Help
Entry
RIN67_04010 CDS
T09877
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lna
Levilactobacillus namurensis
Pathway
lna03420
Nucleotide excision repair
lna03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RIN67_04010 (helD)
03430 Mismatch repair
RIN67_04010 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lna03400
]
RIN67_04010 (helD)
Enzymes [BR:
lna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RIN67_04010 (helD)
DNA repair and recombination proteins [BR:
lna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RIN67_04010 (helD)
MMR (mismatch excision repair)
Other MMR factors
RIN67_04010 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
SLFN-g3_helicase
DEAD
DUF4351
AAA_30
YflT
AAA_16
AAA_14
NACHT
Catalase_C
TMV_coat
Motif
Other DBs
NCBI-ProteinID:
WNN66273
LinkDB
All DBs
Position
869151..871454
Genome browser
AA seq
767 aa
AA seq
DB search
MADSIKAREQKHLDEVVAKIKVAQAEAKKRIDVAESDEAGIRKNFVNNLRLKTDSYEGIM
ETALSVRQQQQMLAERQNSWQHATTELSTLKRLEKRAYFARIDFQEGPNAKPETIYIGLG
SFSDTPDHFLIYDWRAPISSIYYDGELGNVSYQTPDGEQSVDVKLKRQFQIEDGTIVTLY
DTDQTVTDQMLLSALSEHSDTHMKSIVTTIQKEQNQIIRDTHSDLLFVQGAAGSGKTAAI
LQRVAFLLYRYRGHLTAGQVMLFSPNQLFNDYIDQVLPELGEHNMVQMTYYQYAGRRMPK
IDIETLAQRFAESNTPAEKKITQLKGSLAFFNAVTHYADHLEQRGMVFRNIVFQGKPFIP
KEKIQEIYYSFNRNYHLGNRLQATKEALIRILNRRIAGEMKSKWVEETIQDLSKEELDSL
YGDHPREFESADKEFQFLARKVVMQSLESVRRAIVRARFLSINNQYVHMLREMPRHIDLT
QYGITQADWDASVDTTISELRDHRMQLINTTPYLYLYDKIAGKSGDREMRYVFMDEIQDY
NAFQLAFLKTTFPRARFTMLGDLNQAIFTKENSHTLLQELSTMFDPEKTRVVQLTQSYRS
TQQVTDFTKHILKNGEAVTSFAREGELPTMTVAPDEDAALQRVMAELKRNDQDHETTAII
GKDLADCREITEKLTAAGVQVTLIRSENQRLAPGIIVVPSFLAKGLEFDAVIVWHASKSR
YGADDERQLLYTICSRAMHRLSLVAIDQLSPLLSDVPADEFEVVNVD
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
ttggcagattcaatcaaagcccgagaacaaaagcatttagatgaggtcgttgccaagatc
aaggtggcccaagcggaggctaagaaacgaatcgacgttgccgaaagcgatgaggcgggg
attcggaagaactttgtcaacaatctgcggctcaagacggatagttacgaaggcatcatg
gaaaccgcgttatccgtacggcagcagcaacagatgttggctgaacgacagaacagttgg
caacacgccaccacggaattgagtacgttgaagcgcctggagaagcgggcctacttcgct
cgaatcgactttcaggaagggcctaacgccaagccagagaccatctatatcggcctgggg
tccttctcggatacgccggatcacttcctgatctacgactggcgggcgcccatctccagt
atctactacgatggggagctggggaacgtcagctaccagacgccggacggtgaacagagc
gtcgacgtgaagctaaagcggcagttccagatcgaagatggcaccatcgtcacgctgtac
gatacggaccagactgtgacggaccagatgctgctgtcggcgctgagtgaacattccgat
acccatatgaagagtatcgtgaccaccattcaaaaggaacaaaaccagatcatccgggac
acccattccgacctgctgttcgtgcagggggcggcggggtccgggaagacggcggccatc
ttacaacgagtggccttcctcctgtaccgttaccggggacacttaacggcgggacaagtt
atgttgttctcccccaaccaactctttaacgactatatcgaccaagtgctgcctgaactg
ggtgagcacaacatggtccagatgacctactaccagtacgcggggcggcggatgccgaag
atcgacattgagaccctagcgcaacgctttgcggagagtaatacgccggctgagaaaaag
atcacccaattaaaggggagtctggccttcttcaatgcggtgacccattacgcggaccat
ttggaacagcgggggatggtcttccgcaatattgtcttccaaggcaaaccgttcattcct
aaggagaagatccaagagatctactacagtttcaatcgcaactatcacttgggcaaccgg
ctccaggcgactaaggaagccttgattcggatcctgaaccggcggattgcgggagaaatg
aagtctaagtgggttgaagagaccatccaggacctgagtaaagaagagctggatagcctg
tacggggaccatccacgggaattcgaatcggcggacaaggaattccagttcttggcccgt
aaagtggtcatgcagtcactggaatccgttcggcgggccatcgttcgggcacggttcttg
agtatcaataaccaatacgtgcatatgttgcgggagatgccccggcacattgacctgacc
cagtacggcatcacccaggcggattgggatgccagtgtggacaccacgatcagtgaattg
cgcgaccaccggatgcagttgatcaacaccacgccgtacctgtacctttacgataagatt
gccgggaagagcggtgaccgggagatgcgctacgtcttcatggacgagattcaagactac
aatgcgttccagttggcctttttgaagaccacgttcccccgggcgcggtttaccatgctg
ggggatctgaaccaggccatcttcaccaaagaaaacagccacacgttattgcaggagttg
agcaccatgttcgatcctgagaagacgcgggtggtccagttgacccagtcgtaccggtca
acgcaacaggtgaccgacttcaccaagcacatcttgaagaacggggaagcggtgacgtcg
tttgcccgtgaaggggagttgccgacgatgacggtggcgccggacgaggacgctgccctc
caacgggtgatggcggagctgaagcgcaatgaccaggatcacgagaccacggccattatt
ggaaaagacttagcggactgtcgcgagattacggagaagctgacggcagcgggcgttcag
gtgacgctaattcgctcggagaaccagcggctggcgcccggaatcatcgtggtgccgtcg
ttcctggccaaggggctcgagttcgacgcggtcattgtctggcacgcctcgaagagtcgc
tacggggcggacgacgaacggcagttgttgtacaccatctgctcgcgggccatgcaccgg
ttgagcctggtagcgattgaccagttatcgccactgctgagtgacgtgccggcagatgaa
tttgaagtcgtgaatgtagattaa
DBGET
integrated database retrieval system
