Levilactobacillus namurensis: RIN67_04560
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Entry
RIN67_04560 CDS
T09877
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lna
Levilactobacillus namurensis
Pathway
lna03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RIN67_04560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lna03021
]
RIN67_04560
03400 DNA repair and recombination proteins [BR:
lna03400
]
RIN67_04560
Enzymes [BR:
lna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RIN67_04560
Transcription machinery [BR:
lna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RIN67_04560
DNA repair and recombination proteins [BR:
lna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RIN67_04560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WNN66369
LinkDB
All DBs
Position
976239..977189
Genome browser
AA seq
316 aa
AA seq
DB search
MIEFEKPNIHKIDESSNYGKFIVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDGVL
HEFSTIEGVVEDVTQIILNVKKIALKLNGADDQEETMEINVKGPAQVTAGDIVAGADVDV
LNPDLYIATVADGATFHMRMTADKGRGYVSADENKARNTEMPIGVLAVDSIYTPIERVNY
QVENARVGQRADYDKLTLDVWTNSSINPSEAISLAAKILTEHLAMFVDLTDEAKNAEIMV
EKEETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKTEADMMKVRNLGRKSLEE
VKAKLADLGLSLRKED
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaagcctaacattcataaaattgatgagagcagcaattacggcaag
tttattgtcgaaccgttggaacggggttatgggactaccttagggaactcattacgtcgg
atcctgctttcttcattacctggtgcagccgttaccagcattcaaatcgacggggttctg
catgagttttcgactatcgaaggcgtcgttgaagacgttacgcagattatcttgaacgtc
aagaagattgcgttgaagcttaatggcgctgacgatcaggaagaaacgatggagatcaac
gttaagggacctgcacaggtcactgccggtgatatcgtcgctggggcggatgttgatgtg
ttgaacccagacctgtacattgcgacggtcgctgatggggcaaccttccacatgcgaatg
acagcagataagggccgcggctatgtttccgctgacgaaaacaaagctcggaataccgaa
atgccaattggtgttttagctgttgattcgatctacaccccaatcgaacgggttaactac
caagtagagaatgcacgggtcggccaacgggctgactatgataaattgaccctagatgtt
tggacgaacagttcaatcaatcctagcgaggccatttcattagctgcgaaaatcttgacc
gaacacttagcaatgtttgttgacctaacggacgaagctaagaatgcggaaatcatggtt
gaaaaggaagaaactcacaaggaaaagatgcttgagatgactatcgaagagctcgacttg
tcagttcgttcttacaactgtttgaagcgtgctggtatcaacacggttcaagaattgact
aacaagacggaagcggacatgatgaaggttcgtaacttgggtcgcaagtccctggaagaa
gttaaggcaaagttagccgatctcggtttgtcacttcggaaagaagactaa
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